Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-1P50220 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-1P50220 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-1P50220 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-1P50220 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-1P50220 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-1P50220 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-1P50220 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-1P50220 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Nkx2-1P50220 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-1P50220 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-1P50220 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC11.16□□□□□ -0.62
Nkx2-1P50220 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC11.16□□□□□ -0.62
Nkx2-1P50220 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-1P50220 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-1P50220 Gm11025-201ENSMUST00000140773 466 ntBASIC11.16□□□□□ -0.62
Nkx2-1P50220 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-1P50220 AA619741-201ENSMUST00000195095 646 ntBASIC11.16□□□□□ -0.62
Nkx2-1P50220 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-1P50220 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-1P50220 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC11.16□□□□□ -0.62
Nkx2-1P50220 AW822252-206ENSMUST00000208904 237 ntBASIC11.16□□□□□ -0.62
Nkx2-1P50220 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC11.16□□□□□ -0.62
Nkx2-1P50220 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC11.16□□□□□ -0.62
Nkx2-1P50220 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC11.16□□□□□ -0.62
Nkx2-1P50220 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-1P50220 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-1P50220 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-1P50220 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-1P50220 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-1P50220 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-1P50220 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-1P50220 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Nkx2-1P50220 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-1P50220 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.16□□□□□ -0.62
Nkx2-1P50220 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-1P50220 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-1P50220 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.16□□□□□ -0.62
Nkx2-1P50220 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.16□□□□□ -0.62
Nkx2-1P50220 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-1P50220 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-1P50220 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.16□□□□□ -0.62
Nkx2-1P50220 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-1P50220 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-1P50220 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-1P50220 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Nkx2-1P50220 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-1P50220 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-1P50220 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-1P50220 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-1P50220 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.16□□□□□ -0.62
Nkx2-1P50220 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Nkx2-1P50220 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
Nkx2-1P50220 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Nkx2-1P50220 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
Nkx2-1P50220 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Nkx2-1P50220 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-1P50220 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-1P50220 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-1P50220 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-1P50220 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-1P50220 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Nkx2-1P50220 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Nkx2-1P50220 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-1P50220 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC11.15□□□□□ -0.62
Nkx2-1P50220 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC11.15□□□□□ -0.62
Nkx2-1P50220 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC11.15□□□□□ -0.62
Nkx2-1P50220 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Nkx2-1P50220 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC11.15□□□□□ -0.62
Nkx2-1P50220 Gm29310-201ENSMUST00000185468 696 ntBASIC11.15□□□□□ -0.62
Nkx2-1P50220 Gm21825-201ENSMUST00000185728 696 ntBASIC11.15□□□□□ -0.62
Nkx2-1P50220 Gm29109-201ENSMUST00000185895 696 ntBASIC11.15□□□□□ -0.62
Nkx2-1P50220 Gm21896-201ENSMUST00000186520 696 ntBASIC11.15□□□□□ -0.62
Nkx2-1P50220 Gm21873-201ENSMUST00000186728 696 ntBASIC11.15□□□□□ -0.62
Nkx2-1P50220 Gm21794-201ENSMUST00000187056 696 ntBASIC11.15□□□□□ -0.62
Nkx2-1P50220 Gm21880-201ENSMUST00000187275 696 ntBASIC11.15□□□□□ -0.62
Nkx2-1P50220 Gm21826-201ENSMUST00000187451 696 ntBASIC11.15□□□□□ -0.62
Nkx2-1P50220 Gm21198-201ENSMUST00000188393 696 ntBASIC11.15□□□□□ -0.62
Nkx2-1P50220 Gm21749-201ENSMUST00000189343 696 ntBASIC11.15□□□□□ -0.62
Nkx2-1P50220 Gm21901-201ENSMUST00000189568 696 ntBASIC11.15□□□□□ -0.62
Nkx2-1P50220 Gm29424-201ENSMUST00000189716 696 ntBASIC11.15□□□□□ -0.62
Nkx2-1P50220 Gm28599-201ENSMUST00000189838 694 ntBASIC11.15□□□□□ -0.62
Nkx2-1P50220 Gm21867-201ENSMUST00000189917 696 ntBASIC11.15□□□□□ -0.62
Nkx2-1P50220 Gm29269-201ENSMUST00000190087 696 ntBASIC11.15□□□□□ -0.62
Nkx2-1P50220 Gm21722-201ENSMUST00000190153 696 ntBASIC11.15□□□□□ -0.62
Nkx2-1P50220 Gm28423-201ENSMUST00000190701 696 ntBASIC11.15□□□□□ -0.62
Nkx2-1P50220 Gm21899-201ENSMUST00000190745 696 ntBASIC11.15□□□□□ -0.62
Nkx2-1P50220 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC11.15□□□□□ -0.62
Nkx2-1P50220 Gm21910-201ENSMUST00000191163 696 ntBASIC11.15□□□□□ -0.62
Nkx2-1P50220 Gm21849-201ENSMUST00000191571 696 ntBASIC11.15□□□□□ -0.62
Nkx2-1P50220 Gm28678-201ENSMUST00000191593 696 ntBASIC11.15□□□□□ -0.62
Nkx2-1P50220 Gm20910-201ENSMUST00000193268 696 ntBASIC11.15□□□□□ -0.62
Nkx2-1P50220 Gm21871-201ENSMUST00000194621 696 ntBASIC11.15□□□□□ -0.62
Nkx2-1P50220 Gm45612-201ENSMUST00000211320 160 ntBASIC11.15□□□□□ -0.62
Nkx2-1P50220 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC11.15□□□□□ -0.62
Nkx2-1P50220 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-1P50220 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-1P50220 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Nkx2-1P50220 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Nkx2-1P50220 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms