Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Gm8913-201ENSMUST00000209491 641 ntBASIC14.85□□□□□ -0.03
Brca1P48754 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Brca1P48754 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Brca1P48754 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Brca1P48754 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Brca1P48754 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Brca1P48754 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Brca1P48754 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Brca1P48754 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Brca1P48754 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Brca1P48754 Gm38157-201ENSMUST00000194178 1698 ntBASIC14.84□□□□□ -0.03
Brca1P48754 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Brca1P48754 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
Brca1P48754 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Brca1P48754 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Brca1P48754 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Brca1P48754 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Brca1P48754 Gm13813-201ENSMUST00000120998 787 ntBASIC14.84□□□□□ -0.03
Brca1P48754 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Brca1P48754 Gm26361-201ENSMUST00000158868 186 ntBASIC14.84□□□□□ -0.03
Brca1P48754 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Brca1P48754 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC14.84□□□□□ -0.03
Brca1P48754 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Brca1P48754 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC14.84□□□□□ -0.03
Brca1P48754 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Brca1P48754 AC141438.2-201ENSMUST00000215068 271 ntBASIC14.84□□□□□ -0.03
Brca1P48754 AC135114.1-201ENSMUST00000228682 270 ntBASIC14.84□□□□□ -0.03
Brca1P48754 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Brca1P48754 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Brca1P48754 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Brca1P48754 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Brca1P48754 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Brca1P48754 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Brca1P48754 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Brca1P48754 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Brca1P48754 Gm43081-201ENSMUST00000199082 1380 ntBASIC14.84□□□□□ -0.03
Brca1P48754 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Brca1P48754 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Brca1P48754 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Brca1P48754 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Brca1P48754 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Brca1P48754 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.83□□□□□ -0.03
Brca1P48754 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Brca1P48754 Gm12502-201ENSMUST00000120197 444 ntBASIC14.83□□□□□ -0.04
Brca1P48754 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Brca1P48754 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC14.83□□□□□ -0.04
Brca1P48754 Gm43416-201ENSMUST00000201916 1015 ntBASIC14.83□□□□□ -0.04
Brca1P48754 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC14.83□□□□□ -0.04
Brca1P48754 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Brca1P48754 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Brca1P48754 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Brca1P48754 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC14.83□□□□□ -0.04
Brca1P48754 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Brca1P48754 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC14.83□□□□□ -0.04
Brca1P48754 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Brca1P48754 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Brca1P48754 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Brca1P48754 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Brca1P48754 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Brca1P48754 Gm7789-202ENSMUST00000211273 1400 ntBASIC14.83□□□□□ -0.04
Brca1P48754 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.83□□□□□ -0.04
Brca1P48754 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Brca1P48754 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Brca1P48754 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC14.82□□□□□ -0.04
Brca1P48754 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC14.82□□□□□ -0.04
Brca1P48754 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Brca1P48754 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Brca1P48754 Gm22058-201ENSMUST00000083393 310 ntBASIC14.82□□□□□ -0.04
Brca1P48754 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.82□□□□□ -0.04
Brca1P48754 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Brca1P48754 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Brca1P48754 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Brca1P48754 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Brca1P48754 Gm9279-201ENSMUST00000223175 1606 ntBASIC14.82□□□□□ -0.04
Brca1P48754 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Brca1P48754 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC14.82□□□□□ -0.04
Brca1P48754 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Brca1P48754 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC14.82□□□□□ -0.04
Brca1P48754 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Brca1P48754 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Brca1P48754 Gm8194-201ENSMUST00000159783 859 ntBASIC14.82□□□□□ -0.04
Brca1P48754 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC14.82□□□□□ -0.04
Brca1P48754 Gm37201-201ENSMUST00000191845 523 ntBASIC14.82□□□□□ -0.04
Brca1P48754 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Brca1P48754 Dhrs4-202ENSMUST00000226168 828 ntBASIC14.82□□□□□ -0.04
Brca1P48754 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Brca1P48754 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Brca1P48754 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Brca1P48754 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Brca1P48754 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Brca1P48754 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Brca1P48754 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Brca1P48754 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Brca1P48754 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Brca1P48754 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.81□□□□□ -0.04
Brca1P48754 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Brca1P48754 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Brca1P48754 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Brca1P48754 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Brca1P48754 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms