Protein–RNA interactions for Protein: P48678

Lmna, Prelamin-A/C, mousemouse

Known RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LmnaP48678 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LmnaP48678 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LmnaP48678 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LmnaP48678 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LmnaP48678 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LmnaP48678 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LmnaP48678 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LmnaP48678 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LmnaP48678 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC14.04□□□□□ -0.16
LmnaP48678 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14.04□□□□□ -0.16
LmnaP48678 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LmnaP48678 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.04□□□□□ -0.16
LmnaP48678 Gm11814-201ENSMUST00000119515 929 ntBASIC14.04□□□□□ -0.16
LmnaP48678 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC14.04□□□□□ -0.16
LmnaP48678 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LmnaP48678 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.04□□□□□ -0.16
LmnaP48678 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LmnaP48678 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LmnaP48678 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.04□□□□□ -0.16
LmnaP48678 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LmnaP48678 Gm33320-201ENSMUST00000192232 530 ntBASIC14.04□□□□□ -0.16
LmnaP48678 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LmnaP48678 AC159747.1-201ENSMUST00000219903 265 ntBASIC14.04□□□□□ -0.16
LmnaP48678 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.04□□□□□ -0.16
LmnaP48678 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LmnaP48678 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
LmnaP48678 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LmnaP48678 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC14.04□□□□□ -0.16
LmnaP48678 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LmnaP48678 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC14.04□□□□□ -0.16
LmnaP48678 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.04□□□□□ -0.16
LmnaP48678 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LmnaP48678 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LmnaP48678 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LmnaP48678 Rubie-203ENSMUST00000227803 2430 ntBASIC14.04□□□□□ -0.16
LmnaP48678 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LmnaP48678 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LmnaP48678 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LmnaP48678 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
LmnaP48678 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.04□□□□□ -0.16
LmnaP48678 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LmnaP48678 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LmnaP48678 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
LmnaP48678 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
LmnaP48678 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.04□□□□□ -0.16
LmnaP48678 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LmnaP48678 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LmnaP48678 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LmnaP48678 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LmnaP48678 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
LmnaP48678 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LmnaP48678 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
LmnaP48678 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LmnaP48678 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LmnaP48678 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LmnaP48678 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LmnaP48678 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LmnaP48678 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
LmnaP48678 Gm15236-201ENSMUST00000117309 379 ntBASIC14.03□□□□□ -0.16
LmnaP48678 Rn7s1-201ENSMUST00000174924 300 ntBASIC14.03□□□□□ -0.16
LmnaP48678 Rn7s2-201ENSMUST00000175032 300 ntBASIC14.03□□□□□ -0.16
LmnaP48678 Gm26461-201ENSMUST00000175064 290 ntBASIC14.03□□□□□ -0.16
LmnaP48678 Gm27847-201ENSMUST00000183711 107 ntBASIC14.03□□□□□ -0.16
LmnaP48678 Gm27375-201ENSMUST00000183799 107 ntBASIC14.03□□□□□ -0.16
LmnaP48678 Gm37466-201ENSMUST00000195692 652 ntBASIC14.03□□□□□ -0.16
LmnaP48678 Gm5279-201ENSMUST00000199575 745 ntBASIC14.03□□□□□ -0.16
LmnaP48678 Gm6916-202ENSMUST00000205523 195 ntBASIC14.03□□□□□ -0.16
LmnaP48678 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.03□□□□□ -0.16
LmnaP48678 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.03□□□□□ -0.16
LmnaP48678 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LmnaP48678 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LmnaP48678 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LmnaP48678 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LmnaP48678 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LmnaP48678 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LmnaP48678 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LmnaP48678 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
LmnaP48678 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.03□□□□□ -0.16
LmnaP48678 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.03□□□□□ -0.16
LmnaP48678 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LmnaP48678 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.03□□□□□ -0.16
LmnaP48678 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
LmnaP48678 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LmnaP48678 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LmnaP48678 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
LmnaP48678 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
LmnaP48678 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LmnaP48678 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LmnaP48678 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
LmnaP48678 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LmnaP48678 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
LmnaP48678 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LmnaP48678 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.02□□□□□ -0.16
LmnaP48678 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.02□□□□□ -0.16
LmnaP48678 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
LmnaP48678 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LmnaP48678 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LmnaP48678 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.02□□□□□ -0.16
LmnaP48678 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
LmnaP48678 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms