Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx2P48379 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx2P48379 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx2P48379 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx2P48379 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx2P48379 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.14□□□□□ -0.15
Rfx2P48379 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx2P48379 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx2P48379 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx2P48379 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx2P48379 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx2P48379 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx2P48379 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx2P48379 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.14□□□□□ -0.15
Rfx2P48379 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.14□□□□□ -0.15
Rfx2P48379 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Rfx2P48379 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx2P48379 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx2P48379 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.13□□□□□ -0.15
Rfx2P48379 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Rfx2P48379 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx2P48379 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.13□□□□□ -0.15
Rfx2P48379 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx2P48379 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Rfx2P48379 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx2P48379 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC14.13□□□□□ -0.15
Rfx2P48379 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.13□□□□□ -0.15
Rfx2P48379 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rfx2P48379 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx2P48379 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx2P48379 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Rfx2P48379 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx2P48379 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx2P48379 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rfx2P48379 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx2P48379 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx2P48379 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Rfx2P48379 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx2P48379 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx2P48379 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx2P48379 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.12□□□□□ -0.15
Rfx2P48379 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.12□□□□□ -0.15
Rfx2P48379 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Rfx2P48379 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx2P48379 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx2P48379 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx2P48379 Gm2495-201ENSMUST00000191160 466 ntBASIC14.12□□□□□ -0.15
Rfx2P48379 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.12□□□□□ -0.15
Rfx2P48379 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx2P48379 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.12□□□□□ -0.15
Rfx2P48379 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx2P48379 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx2P48379 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Rfx2P48379 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx2P48379 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.12□□□□□ -0.15
Rfx2P48379 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx2P48379 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx2P48379 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx2P48379 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx2P48379 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx2P48379 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx2P48379 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx2P48379 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14.12□□□□□ -0.15
Rfx2P48379 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx2P48379 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx2P48379 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx2P48379 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Rfx2P48379 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx2P48379 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.11□□□□□ -0.15
Rfx2P48379 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx2P48379 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx2P48379 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx2P48379 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx2P48379 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx2P48379 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Rfx2P48379 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.11□□□□□ -0.15
Rfx2P48379 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx2P48379 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx2P48379 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx2P48379 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx2P48379 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx2P48379 Gm12928-201ENSMUST00000117115 573 ntBASIC14.11□□□□□ -0.15
Rfx2P48379 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx2P48379 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Rfx2P48379 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.11□□□□□ -0.15
Rfx2P48379 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Rfx2P48379 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.11□□□□□ -0.15
Rfx2P48379 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx2P48379 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.11□□□□□ -0.15
Rfx2P48379 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx2P48379 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx2P48379 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx2P48379 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx2P48379 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx2P48379 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Rfx2P48379 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx2P48379 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx2P48379 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Rfx2P48379 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx2P48379 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms