Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Nkx2-2P42586 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-2P42586 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.37□□□□□ -0.43
Nkx2-2P42586 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-2P42586 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-2P42586 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-2P42586 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.36□□□□□ -0.43
Nkx2-2P42586 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-2P42586 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-2P42586 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-2P42586 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-2P42586 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-2P42586 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Nkx2-2P42586 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-2P42586 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.36□□□□□ -0.43
Nkx2-2P42586 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Nkx2-2P42586 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-2P42586 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-2P42586 Gm13689-201ENSMUST00000119360 685 ntBASIC12.36□□□□□ -0.43
Nkx2-2P42586 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-2P42586 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-2P42586 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.36□□□□□ -0.43
Nkx2-2P42586 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-2P42586 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.36□□□□□ -0.43
Nkx2-2P42586 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.36□□□□□ -0.43
Nkx2-2P42586 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-2P42586 Gm15823-201ENSMUST00000064305 670 ntBASIC12.36□□□□□ -0.43
Nkx2-2P42586 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-2P42586 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-2P42586 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.36□□□□□ -0.43
Nkx2-2P42586 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Nkx2-2P42586 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-2P42586 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Nkx2-2P42586 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-2P42586 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Nkx2-2P42586 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-2P42586 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-2P42586 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-2P42586 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-2P42586 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-2P42586 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-2P42586 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-2P42586 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-2P42586 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-2P42586 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-2P42586 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Nkx2-2P42586 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Nkx2-2P42586 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-2P42586 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.35□□□□□ -0.43
Nkx2-2P42586 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Nkx2-2P42586 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-2P42586 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-2P42586 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-2P42586 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Nkx2-2P42586 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Nkx2-2P42586 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-2P42586 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-2P42586 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-2P42586 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Nkx2-2P42586 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-2P42586 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.35□□□□□ -0.43
Nkx2-2P42586 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-2P42586 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-2P42586 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Nkx2-2P42586 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-2P42586 Gm15371-201ENSMUST00000117057 784 ntBASIC12.35□□□□□ -0.43
Nkx2-2P42586 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.35□□□□□ -0.43
Nkx2-2P42586 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-2P42586 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Nkx2-2P42586 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.35□□□□□ -0.43
Nkx2-2P42586 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.35□□□□□ -0.43
Nkx2-2P42586 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-2P42586 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Nkx2-2P42586 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-2P42586 Gm45841-201ENSMUST00000207700 164 ntBASIC12.35□□□□□ -0.43
Nkx2-2P42586 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.35□□□□□ -0.43
Nkx2-2P42586 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-2P42586 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-2P42586 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Nkx2-2P42586 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-2P42586 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-2P42586 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-2P42586 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.35□□□□□ -0.43
Nkx2-2P42586 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.35□□□□□ -0.43
Nkx2-2P42586 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.35□□□□□ -0.43
Nkx2-2P42586 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Nkx2-2P42586 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-2P42586 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-2P42586 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-2P42586 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-2P42586 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Nkx2-2P42586 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-2P42586 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.34□□□□□ -0.43
Nkx2-2P42586 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-2P42586 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-2P42586 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Nkx2-2P42586 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.34□□□□□ -0.43
Nkx2-2P42586 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
Nkx2-2P42586 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-2P42586 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms