Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cd9P40240 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.29□□□□□ -0.28
Cd9P40240 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cd9P40240 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cd9P40240 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cd9P40240 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cd9P40240 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cd9P40240 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.29□□□□□ -0.28
Cd9P40240 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.29□□□□□ -0.28
Cd9P40240 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.29□□□□□ -0.28
Cd9P40240 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cd9P40240 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cd9P40240 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.29□□□□□ -0.28
Cd9P40240 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cd9P40240 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cd9P40240 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Cd9P40240 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cd9P40240 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cd9P40240 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.29□□□□□ -0.28
Cd9P40240 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.29□□□□□ -0.28
Cd9P40240 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cd9P40240 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cd9P40240 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.29□□□□□ -0.28
Cd9P40240 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cd9P40240 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.29□□□□□ -0.28
Cd9P40240 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cd9P40240 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cd9P40240 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cd9P40240 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cd9P40240 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cd9P40240 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cd9P40240 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cd9P40240 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cd9P40240 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Cd9P40240 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cd9P40240 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cd9P40240 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cd9P40240 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cd9P40240 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cd9P40240 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.28□□□□□ -0.28
Cd9P40240 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cd9P40240 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cd9P40240 Gm5687-201ENSMUST00000118252 640 ntBASIC13.28□□□□□ -0.28
Cd9P40240 Gm13689-201ENSMUST00000119360 685 ntBASIC13.28□□□□□ -0.28
Cd9P40240 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Cd9P40240 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.28□□□□□ -0.28
Cd9P40240 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cd9P40240 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cd9P40240 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Cd9P40240 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cd9P40240 Gm44397-201ENSMUST00000195950 113 ntBASIC13.28□□□□□ -0.28
Cd9P40240 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cd9P40240 Gm18307-201ENSMUST00000206864 949 ntBASIC13.28□□□□□ -0.28
Cd9P40240 Gm6983-201ENSMUST00000214912 628 ntBASIC13.28□□□□□ -0.28
Cd9P40240 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.28□□□□□ -0.28
Cd9P40240 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cd9P40240 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cd9P40240 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cd9P40240 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cd9P40240 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cd9P40240 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cd9P40240 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cd9P40240 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cd9P40240 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.28□□□□□ -0.28
Cd9P40240 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cd9P40240 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.28□□□□□ -0.28
Cd9P40240 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cd9P40240 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cd9P40240 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cd9P40240 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cd9P40240 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cd9P40240 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cd9P40240 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.27□□□□□ -0.28
Cd9P40240 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cd9P40240 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Cd9P40240 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cd9P40240 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cd9P40240 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cd9P40240 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cd9P40240 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cd9P40240 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cd9P40240 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cd9P40240 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.27□□□□□ -0.29
Cd9P40240 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.27□□□□□ -0.29
Cd9P40240 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.27□□□□□ -0.29
Cd9P40240 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cd9P40240 Mir6977-201ENSMUST00000184960 64 ntBASIC13.27□□□□□ -0.29
Cd9P40240 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cd9P40240 Gm19931-201ENSMUST00000198920 368 ntBASIC13.27□□□□□ -0.29
Cd9P40240 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cd9P40240 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.27□□□□□ -0.29
Cd9P40240 Gm18624-201ENSMUST00000220966 658 ntBASIC13.27□□□□□ -0.29
Cd9P40240 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.27□□□□□ -0.29
Cd9P40240 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.27□□□□□ -0.29
Cd9P40240 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.27□□□□□ -0.29
Cd9P40240 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cd9P40240 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cd9P40240 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cd9P40240 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cd9P40240 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms