Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Chd1P40201 Gm10774-201ENSMUST00000188689 204 ntBASIC19.79■□□□□ 0.76
Chd1P40201 Gm19166-201ENSMUST00000196041 1063 ntBASIC19.79■□□□□ 0.76
Chd1P40201 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC19.79■□□□□ 0.76
Chd1P40201 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Chd1P40201 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chd1P40201 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chd1P40201 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chd1P40201 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chd1P40201 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Chd1P40201 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC19.78■□□□□ 0.76
Chd1P40201 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Chd1P40201 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Chd1P40201 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chd1P40201 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Chd1P40201 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC19.78■□□□□ 0.76
Chd1P40201 Gm15573-201ENSMUST00000119487 540 ntBASIC19.78■□□□□ 0.76
Chd1P40201 Gm23218-201ENSMUST00000158124 276 ntBASIC19.78■□□□□ 0.76
Chd1P40201 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC19.78■□□□□ 0.76
Chd1P40201 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC19.78■□□□□ 0.76
Chd1P40201 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chd1P40201 Gm28882-201ENSMUST00000185504 314 ntBASIC19.78■□□□□ 0.76
Chd1P40201 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC19.78■□□□□ 0.76
Chd1P40201 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC19.78■□□□□ 0.76
Chd1P40201 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Chd1P40201 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chd1P40201 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chd1P40201 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chd1P40201 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Chd1P40201 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chd1P40201 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.77■□□□□ 0.76
Chd1P40201 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chd1P40201 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chd1P40201 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chd1P40201 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Chd1P40201 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC19.77■□□□□ 0.76
Chd1P40201 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC19.77■□□□□ 0.76
Chd1P40201 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Chd1P40201 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Chd1P40201 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Chd1P40201 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chd1P40201 Gm42872-201ENSMUST00000200026 1967 ntBASIC19.77■□□□□ 0.76
Chd1P40201 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Chd1P40201 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Chd1P40201 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.77■□□□□ 0.75
Chd1P40201 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Chd1P40201 Gm25545-201ENSMUST00000122673 323 ntBASIC19.76■□□□□ 0.75
Chd1P40201 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Chd1P40201 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Chd1P40201 Gm25881-201ENSMUST00000157783 103 ntBASIC19.76■□□□□ 0.75
Chd1P40201 Gm9230-201ENSMUST00000188228 532 ntBASIC19.76■□□□□ 0.75
Chd1P40201 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chd1P40201 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chd1P40201 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Chd1P40201 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chd1P40201 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Chd1P40201 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chd1P40201 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC19.76■□□□□ 0.75
Chd1P40201 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Chd1P40201 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chd1P40201 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chd1P40201 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chd1P40201 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chd1P40201 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chd1P40201 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chd1P40201 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Chd1P40201 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chd1P40201 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Chd1P40201 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC19.75■□□□□ 0.75
Chd1P40201 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC19.75■□□□□ 0.75
Chd1P40201 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chd1P40201 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Chd1P40201 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chd1P40201 Gm38355-201ENSMUST00000192514 1570 ntBASIC19.75■□□□□ 0.75
Chd1P40201 Gm45133-201ENSMUST00000207548 2773 ntBASIC19.75■□□□□ 0.75
Chd1P40201 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Chd1P40201 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Chd1P40201 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Chd1P40201 Gm6485-201ENSMUST00000160676 439 ntBASIC19.75■□□□□ 0.75
Chd1P40201 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Chd1P40201 Gm18974-201ENSMUST00000221478 1031 ntBASIC19.75■□□□□ 0.75
Chd1P40201 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chd1P40201 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chd1P40201 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chd1P40201 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Chd1P40201 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Chd1P40201 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chd1P40201 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Chd1P40201 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chd1P40201 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chd1P40201 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chd1P40201 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC19.75■□□□□ 0.75
Chd1P40201 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chd1P40201 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chd1P40201 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chd1P40201 Gm12314-201ENSMUST00000118104 538 ntBASIC19.74■□□□□ 0.75
Chd1P40201 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC19.74■□□□□ 0.75
Chd1P40201 Gm25072-201ENSMUST00000175233 235 ntBASIC19.74■□□□□ 0.75
Chd1P40201 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC19.74■□□□□ 0.75
Chd1P40201 Gm4482-201ENSMUST00000200876 742 ntBASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms