Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Timp3P39876 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Timp3P39876 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Timp3P39876 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC11.08□□□□□ -0.64
Timp3P39876 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Timp3P39876 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Timp3P39876 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Timp3P39876 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Timp3P39876 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Timp3P39876 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Timp3P39876 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Timp3P39876 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Timp3P39876 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Timp3P39876 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Timp3P39876 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
Timp3P39876 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Timp3P39876 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Timp3P39876 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Timp3P39876 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Timp3P39876 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Timp3P39876 Il17rd-203ENSMUST00000225146 3366 ntBASIC11.07□□□□□ -0.64
Timp3P39876 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Timp3P39876 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Timp3P39876 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Timp3P39876 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC11.07□□□□□ -0.64
Timp3P39876 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Timp3P39876 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC11.07□□□□□ -0.64
Timp3P39876 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.07□□□□□ -0.64
Timp3P39876 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Timp3P39876 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Timp3P39876 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Timp3P39876 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Timp3P39876 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Timp3P39876 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Timp3P39876 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.07□□□□□ -0.64
Timp3P39876 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Timp3P39876 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Timp3P39876 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Timp3P39876 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.07□□□□□ -0.64
Timp3P39876 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.07□□□□□ -0.64
Timp3P39876 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Timp3P39876 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Timp3P39876 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Timp3P39876 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC11.07□□□□□ -0.64
Timp3P39876 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Timp3P39876 Gm17794-201ENSMUST00000220252 955 ntBASIC11.07□□□□□ -0.64
Timp3P39876 AC156560.2-201ENSMUST00000221232 264 ntBASIC11.07□□□□□ -0.64
Timp3P39876 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Timp3P39876 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Timp3P39876 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.07□□□□□ -0.64
Timp3P39876 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Timp3P39876 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Timp3P39876 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Timp3P39876 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Timp3P39876 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
Timp3P39876 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Timp3P39876 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Timp3P39876 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Timp3P39876 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Timp3P39876 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Timp3P39876 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Timp3P39876 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Timp3P39876 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Timp3P39876 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
Timp3P39876 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Timp3P39876 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Timp3P39876 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Timp3P39876 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Timp3P39876 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Timp3P39876 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.06□□□□□ -0.64
Timp3P39876 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Timp3P39876 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Timp3P39876 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Timp3P39876 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Timp3P39876 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Timp3P39876 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Timp3P39876 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Timp3P39876 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Timp3P39876 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Timp3P39876 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Timp3P39876 Gm15824-201ENSMUST00000119516 955 ntBASIC11.06□□□□□ -0.64
Timp3P39876 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.06□□□□□ -0.64
Timp3P39876 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Timp3P39876 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC11.06□□□□□ -0.64
Timp3P39876 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC11.06□□□□□ -0.64
Timp3P39876 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Timp3P39876 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Timp3P39876 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.06□□□□□ -0.64
Timp3P39876 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.06□□□□□ -0.64
Timp3P39876 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Timp3P39876 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Timp3P39876 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Timp3P39876 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC11.06□□□□□ -0.64
Timp3P39876 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.06□□□□□ -0.64
Timp3P39876 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Timp3P39876 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Timp3P39876 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Timp3P39876 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Timp3P39876 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Timp3P39876 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms