Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gm15321-201ENSMUST00000121290 288 ntBASIC13.45□□□□□ -0.26
LdlrP35951 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.45□□□□□ -0.26
LdlrP35951 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LdlrP35951 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LdlrP35951 Gm43433-201ENSMUST00000196573 481 ntBASIC13.45□□□□□ -0.26
LdlrP35951 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.45□□□□□ -0.26
LdlrP35951 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LdlrP35951 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LdlrP35951 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LdlrP35951 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LdlrP35951 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LdlrP35951 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LdlrP35951 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
LdlrP35951 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.45□□□□□ -0.26
LdlrP35951 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
LdlrP35951 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LdlrP35951 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LdlrP35951 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.45□□□□□ -0.26
LdlrP35951 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LdlrP35951 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LdlrP35951 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LdlrP35951 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
LdlrP35951 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.44□□□□□ -0.26
LdlrP35951 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LdlrP35951 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LdlrP35951 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
LdlrP35951 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LdlrP35951 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LdlrP35951 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LdlrP35951 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LdlrP35951 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LdlrP35951 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.44□□□□□ -0.26
LdlrP35951 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LdlrP35951 Gm24694-201ENSMUST00000180054 110 ntBASIC13.44□□□□□ -0.26
LdlrP35951 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LdlrP35951 Gm27663-201ENSMUST00000184839 110 ntBASIC13.44□□□□□ -0.26
LdlrP35951 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.44□□□□□ -0.26
LdlrP35951 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.44□□□□□ -0.26
LdlrP35951 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
LdlrP35951 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LdlrP35951 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LdlrP35951 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LdlrP35951 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LdlrP35951 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LdlrP35951 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.44□□□□□ -0.26
LdlrP35951 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
LdlrP35951 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
LdlrP35951 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LdlrP35951 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.44□□□□□ -0.26
LdlrP35951 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
LdlrP35951 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
LdlrP35951 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LdlrP35951 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LdlrP35951 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LdlrP35951 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LdlrP35951 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LdlrP35951 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
LdlrP35951 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LdlrP35951 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LdlrP35951 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.43□□□□□ -0.26
LdlrP35951 Mir698-201ENSMUST00000102164 109 ntBASIC13.43□□□□□ -0.26
LdlrP35951 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.43□□□□□ -0.26
LdlrP35951 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.43□□□□□ -0.26
LdlrP35951 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
LdlrP35951 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
LdlrP35951 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LdlrP35951 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LdlrP35951 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.43□□□□□ -0.26
LdlrP35951 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.43□□□□□ -0.26
LdlrP35951 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LdlrP35951 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.43□□□□□ -0.26
LdlrP35951 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.43□□□□□ -0.26
LdlrP35951 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.43□□□□□ -0.26
LdlrP35951 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LdlrP35951 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LdlrP35951 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LdlrP35951 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
LdlrP35951 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LdlrP35951 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LdlrP35951 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
LdlrP35951 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LdlrP35951 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LdlrP35951 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
LdlrP35951 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
LdlrP35951 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LdlrP35951 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LdlrP35951 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LdlrP35951 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LdlrP35951 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LdlrP35951 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LdlrP35951 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LdlrP35951 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LdlrP35951 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LdlrP35951 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
LdlrP35951 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.42□□□□□ -0.26
LdlrP35951 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LdlrP35951 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LdlrP35951 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
LdlrP35951 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LdlrP35951 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms