Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc1P35601 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.2□□□□□ -0.14
Rfc1P35601 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc1P35601 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc1P35601 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc1P35601 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc1P35601 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc1P35601 Gm27920-201ENSMUST00000183953 96 ntBASIC14.2□□□□□ -0.14
Rfc1P35601 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc1P35601 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.2□□□□□ -0.14
Rfc1P35601 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc1P35601 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc1P35601 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc1P35601 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc1P35601 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc1P35601 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc1P35601 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc1P35601 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc1P35601 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc1P35601 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc1P35601 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc1P35601 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc1P35601 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc1P35601 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc1P35601 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc1P35601 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc1P35601 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfc1P35601 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfc1P35601 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfc1P35601 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfc1P35601 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfc1P35601 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Rfc1P35601 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfc1P35601 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rfc1P35601 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rfc1P35601 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rfc1P35601 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfc1P35601 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfc1P35601 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfc1P35601 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.19□□□□□ -0.14
Rfc1P35601 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rfc1P35601 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rfc1P35601 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rfc1P35601 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rfc1P35601 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rfc1P35601 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.19□□□□□ -0.14
Rfc1P35601 Gm17271-201ENSMUST00000165535 355 ntBASIC14.19□□□□□ -0.14
Rfc1P35601 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.19□□□□□ -0.14
Rfc1P35601 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.19□□□□□ -0.14
Rfc1P35601 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.19□□□□□ -0.14
Rfc1P35601 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfc1P35601 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfc1P35601 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfc1P35601 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfc1P35601 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfc1P35601 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.19□□□□□ -0.14
Rfc1P35601 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfc1P35601 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfc1P35601 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfc1P35601 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Rfc1P35601 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rfc1P35601 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfc1P35601 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfc1P35601 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfc1P35601 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfc1P35601 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rfc1P35601 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfc1P35601 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfc1P35601 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
Rfc1P35601 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfc1P35601 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfc1P35601 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Rfc1P35601 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfc1P35601 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfc1P35601 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfc1P35601 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfc1P35601 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfc1P35601 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rfc1P35601 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.18□□□□□ -0.14
Rfc1P35601 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfc1P35601 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rfc1P35601 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfc1P35601 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC14.18□□□□□ -0.14
Rfc1P35601 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfc1P35601 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfc1P35601 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfc1P35601 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.18□□□□□ -0.14
Rfc1P35601 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.18□□□□□ -0.14
Rfc1P35601 Gm6443-201ENSMUST00000203599 874 ntBASIC14.18□□□□□ -0.14
Rfc1P35601 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfc1P35601 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Rfc1P35601 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfc1P35601 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfc1P35601 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.18□□□□□ -0.14
Rfc1P35601 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Rfc1P35601 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfc1P35601 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfc1P35601 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.18□□□□□ -0.14
Rfc1P35601 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfc1P35601 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms