Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Mmp13P33435 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Mmp13P33435 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp13P33435 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp13P33435 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Mmp13P33435 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp13P33435 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp13P33435 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp13P33435 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp13P33435 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Mmp13P33435 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.82□□□□□ -0.2
Mmp13P33435 Gm15487-201ENSMUST00000122373 465 ntBASIC13.82□□□□□ -0.2
Mmp13P33435 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp13P33435 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Mmp13P33435 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp13P33435 Gm27838-201ENSMUST00000184829 128 ntBASIC13.82□□□□□ -0.2
Mmp13P33435 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.82□□□□□ -0.2
Mmp13P33435 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp13P33435 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Mmp13P33435 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp13P33435 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp13P33435 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp13P33435 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.82□□□□□ -0.2
Mmp13P33435 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp13P33435 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp13P33435 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Mmp13P33435 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp13P33435 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp13P33435 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Mmp13P33435 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Mmp13P33435 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Mmp13P33435 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.82□□□□□ -0.2
Mmp13P33435 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp13P33435 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp13P33435 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp13P33435 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp13P33435 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp13P33435 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp13P33435 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Mmp13P33435 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp13P33435 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp13P33435 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Mmp13P33435 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp13P33435 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp13P33435 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp13P33435 Mir698-201ENSMUST00000102164 109 ntBASIC13.81□□□□□ -0.2
Mmp13P33435 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp13P33435 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.81□□□□□ -0.2
Mmp13P33435 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp13P33435 Gm4875-201ENSMUST00000118257 786 ntBASIC13.81□□□□□ -0.2
Mmp13P33435 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Mmp13P33435 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.81□□□□□ -0.2
Mmp13P33435 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.81□□□□□ -0.2
Mmp13P33435 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Mmp13P33435 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.81□□□□□ -0.2
Mmp13P33435 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.81□□□□□ -0.2
Mmp13P33435 Gm7063-201ENSMUST00000186840 981 ntBASIC13.81□□□□□ -0.2
Mmp13P33435 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.81□□□□□ -0.2
Mmp13P33435 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.81□□□□□ -0.2
Mmp13P33435 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.81□□□□□ -0.2
Mmp13P33435 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp13P33435 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Mmp13P33435 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Mmp13P33435 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp13P33435 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp13P33435 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.81□□□□□ -0.2
Mmp13P33435 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp13P33435 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp13P33435 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp13P33435 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp13P33435 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.81□□□□□ -0.2
Mmp13P33435 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.81□□□□□ -0.2
Mmp13P33435 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp13P33435 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Mmp13P33435 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Mmp13P33435 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Mmp13P33435 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Mmp13P33435 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Mmp13P33435 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Mmp13P33435 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.8□□□□□ -0.2
Mmp13P33435 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Mmp13P33435 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Mmp13P33435 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Mmp13P33435 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Mmp13P33435 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Mmp13P33435 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Mmp13P33435 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.8□□□□□ -0.2
Mmp13P33435 Gm43703-201ENSMUST00000200523 763 ntBASIC13.8□□□□□ -0.2
Mmp13P33435 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Mmp13P33435 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.8□□□□□ -0.2
Mmp13P33435 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.8□□□□□ -0.2
Mmp13P33435 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.8□□□□□ -0.2
Mmp13P33435 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.8□□□□□ -0.2
Mmp13P33435 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.8□□□□□ -0.2
Mmp13P33435 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Mmp13P33435 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Mmp13P33435 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Mmp13P33435 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Mmp13P33435 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Mmp13P33435 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms