Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vcam1P29533 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Vcam1P29533 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vcam1P29533 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vcam1P29533 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Vcam1P29533 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vcam1P29533 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vcam1P29533 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Vcam1P29533 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Vcam1P29533 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vcam1P29533 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vcam1P29533 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vcam1P29533 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC15.41■□□□□ 0.06
Vcam1P29533 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC15.41■□□□□ 0.06
Vcam1P29533 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Vcam1P29533 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Vcam1P29533 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vcam1P29533 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Vcam1P29533 Gm7584-201ENSMUST00000175829 940 ntBASIC15.41■□□□□ 0.06
Vcam1P29533 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Vcam1P29533 Gm29396-201ENSMUST00000185659 716 ntBASIC15.41■□□□□ 0.06
Vcam1P29533 Gm38266-201ENSMUST00000194931 421 ntBASIC15.41■□□□□ 0.06
Vcam1P29533 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC15.41■□□□□ 0.06
Vcam1P29533 Gm3961-201ENSMUST00000204425 994 ntBASIC15.41■□□□□ 0.06
Vcam1P29533 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC15.41■□□□□ 0.06
Vcam1P29533 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC15.41■□□□□ 0.06
Vcam1P29533 Cts7-204ENSMUST00000225321 1257 ntBASIC15.41■□□□□ 0.06
Vcam1P29533 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vcam1P29533 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vcam1P29533 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC15.41■□□□□ 0.06
Vcam1P29533 Gm12626-201ENSMUST00000117339 1983 ntBASIC15.41■□□□□ 0.06
Vcam1P29533 Gm12623-201ENSMUST00000119849 1983 ntBASIC15.41■□□□□ 0.06
Vcam1P29533 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vcam1P29533 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vcam1P29533 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vcam1P29533 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Vcam1P29533 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Vcam1P29533 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vcam1P29533 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vcam1P29533 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Vcam1P29533 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vcam1P29533 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Vcam1P29533 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vcam1P29533 Gm21451-201ENSMUST00000111062 2775 ntBASIC15.41■□□□□ 0.06
Vcam1P29533 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vcam1P29533 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vcam1P29533 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vcam1P29533 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Vcam1P29533 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vcam1P29533 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Vcam1P29533 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vcam1P29533 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vcam1P29533 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Vcam1P29533 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vcam1P29533 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Vcam1P29533 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vcam1P29533 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Vcam1P29533 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vcam1P29533 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Vcam1P29533 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vcam1P29533 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC15.4■□□□□ 0.06
Vcam1P29533 Gm26185-201ENSMUST00000157692 266 ntBASIC15.4■□□□□ 0.06
Vcam1P29533 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Vcam1P29533 Gm37042-201ENSMUST00000193816 581 ntBASIC15.4■□□□□ 0.06
Vcam1P29533 Gm43758-201ENSMUST00000199500 367 ntBASIC15.4■□□□□ 0.06
Vcam1P29533 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC15.4■□□□□ 0.06
Vcam1P29533 Gm7783-201ENSMUST00000204795 781 ntBASIC15.4■□□□□ 0.06
Vcam1P29533 Gm4768-201ENSMUST00000206199 686 ntBASIC15.4■□□□□ 0.06
Vcam1P29533 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vcam1P29533 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Vcam1P29533 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Vcam1P29533 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vcam1P29533 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Vcam1P29533 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vcam1P29533 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vcam1P29533 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vcam1P29533 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vcam1P29533 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.06
Vcam1P29533 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
Vcam1P29533 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC15.39■□□□□ 0.05
Vcam1P29533 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Vcam1P29533 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vcam1P29533 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vcam1P29533 Gm13350-201ENSMUST00000120519 479 ntBASIC15.39■□□□□ 0.05
Vcam1P29533 Gm13342-201ENSMUST00000121055 207 ntBASIC15.39■□□□□ 0.05
Vcam1P29533 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
Vcam1P29533 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Vcam1P29533 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC15.39■□□□□ 0.05
Vcam1P29533 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC15.39■□□□□ 0.05
Vcam1P29533 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vcam1P29533 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC15.39■□□□□ 0.05
Vcam1P29533 Gm6334-201ENSMUST00000207083 228 ntBASIC15.39■□□□□ 0.05
Vcam1P29533 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC15.39■□□□□ 0.05
Vcam1P29533 Gm8227-201ENSMUST00000223306 571 ntBASIC15.39■□□□□ 0.05
Vcam1P29533 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vcam1P29533 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Vcam1P29533 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vcam1P29533 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vcam1P29533 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vcam1P29533 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms