Protein–RNA interactions for Protein: P28271

Aco1, Cytoplasmic aconitate hydratase, mousemouse

Known RBP Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aco1P28271 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Aco1P28271 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Aco1P28271 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC15.28■□□□□ 0.04
Aco1P28271 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Aco1P28271 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Aco1P28271 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC15.28■□□□□ 0.04
Aco1P28271 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Aco1P28271 Gm18473-201ENSMUST00000220543 868 ntBASIC15.28■□□□□ 0.04
Aco1P28271 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Aco1P28271 Gm28386-201ENSMUST00000189147 1849 ntBASIC15.28■□□□□ 0.04
Aco1P28271 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC15.28■□□□□ 0.04
Aco1P28271 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Aco1P28271 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Aco1P28271 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Aco1P28271 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Aco1P28271 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Aco1P28271 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Aco1P28271 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Aco1P28271 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Aco1P28271 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC15.27■□□□□ 0.04
Aco1P28271 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Aco1P28271 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Aco1P28271 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Aco1P28271 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Aco1P28271 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Aco1P28271 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Aco1P28271 Gm13050-201ENSMUST00000122149 1345 ntBASIC15.27■□□□□ 0.04
Aco1P28271 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Aco1P28271 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Aco1P28271 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Aco1P28271 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Aco1P28271 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Aco1P28271 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Aco1P28271 Gm12742-201ENSMUST00000117326 410 ntBASIC15.27■□□□□ 0.04
Aco1P28271 Gm12957-201ENSMUST00000117835 377 ntBASIC15.27■□□□□ 0.04
Aco1P28271 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Aco1P28271 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Aco1P28271 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Aco1P28271 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Aco1P28271 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Aco1P28271 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Aco1P28271 Gm9124-201ENSMUST00000191789 1092 ntBASIC15.27■□□□□ 0.04
Aco1P28271 Gm9113-201ENSMUST00000192510 1018 ntBASIC15.27■□□□□ 0.04
Aco1P28271 Gm9131-201ENSMUST00000193557 1089 ntBASIC15.27■□□□□ 0.04
Aco1P28271 Gm9121-201ENSMUST00000193749 1071 ntBASIC15.27■□□□□ 0.04
Aco1P28271 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Aco1P28271 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC15.27■□□□□ 0.04
Aco1P28271 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Aco1P28271 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Aco1P28271 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Aco1P28271 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Aco1P28271 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Aco1P28271 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Aco1P28271 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Aco1P28271 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Aco1P28271 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Aco1P28271 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Aco1P28271 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Aco1P28271 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Aco1P28271 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Aco1P28271 Gm43273-201ENSMUST00000199649 2594 ntBASIC15.27■□□□□ 0.03
Aco1P28271 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Aco1P28271 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Aco1P28271 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Aco1P28271 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.26■□□□□ 0.03
Aco1P28271 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Aco1P28271 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Aco1P28271 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Aco1P28271 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Aco1P28271 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Aco1P28271 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Aco1P28271 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC15.26■□□□□ 0.03
Aco1P28271 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Aco1P28271 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Aco1P28271 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC15.26■□□□□ 0.03
Aco1P28271 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Aco1P28271 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Aco1P28271 Gm10327-201ENSMUST00000105222 1002 ntBASIC15.26■□□□□ 0.03
Aco1P28271 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC15.26■□□□□ 0.03
Aco1P28271 Gm6152-201ENSMUST00000151704 340 ntBASIC15.26■□□□□ 0.03
Aco1P28271 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Aco1P28271 Gm24196-201ENSMUST00000179161 110 ntBASIC15.26■□□□□ 0.03
Aco1P28271 Gm27731-201ENSMUST00000185192 107 ntBASIC15.26■□□□□ 0.03
Aco1P28271 Gm45784-201ENSMUST00000188360 142 ntBASIC15.26■□□□□ 0.03
Aco1P28271 Gm42442-201ENSMUST00000197951 1133 ntBASIC15.26■□□□□ 0.03
Aco1P28271 Gm9299-201ENSMUST00000206392 1140 ntBASIC15.26■□□□□ 0.03
Aco1P28271 AC122459.1-201ENSMUST00000228373 885 ntBASIC15.26■□□□□ 0.03
Aco1P28271 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Aco1P28271 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Aco1P28271 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Aco1P28271 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC15.26■□□□□ 0.03
Aco1P28271 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Aco1P28271 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Aco1P28271 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Aco1P28271 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Aco1P28271 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Aco1P28271 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC15.26■□□□□ 0.03
Aco1P28271 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Aco1P28271 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Aco1P28271 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms