Protein–RNA interactions for Protein: P27661

H2afx, Histone H2AX, mousemouse

Known RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afxP27661 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2afxP27661 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2afxP27661 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC14.05□□□□□ -0.16
H2afxP27661 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC14.05□□□□□ -0.16
H2afxP27661 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
H2afxP27661 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2afxP27661 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC14.05□□□□□ -0.16
H2afxP27661 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2afxP27661 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
H2afxP27661 Gm37014-201ENSMUST00000194723 2253 ntBASIC14.04□□□□□ -0.16
H2afxP27661 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afxP27661 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afxP27661 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC14.04□□□□□ -0.16
H2afxP27661 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afxP27661 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.04□□□□□ -0.16
H2afxP27661 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC14.04□□□□□ -0.16
H2afxP27661 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
H2afxP27661 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
H2afxP27661 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afxP27661 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afxP27661 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afxP27661 Mir698-201ENSMUST00000102164 109 ntBASIC14.04□□□□□ -0.16
H2afxP27661 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.04□□□□□ -0.16
H2afxP27661 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.04□□□□□ -0.16
H2afxP27661 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
H2afxP27661 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
H2afxP27661 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
H2afxP27661 Gm45841-201ENSMUST00000207700 164 ntBASIC14.04□□□□□ -0.16
H2afxP27661 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.04□□□□□ -0.16
H2afxP27661 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.04□□□□□ -0.16
H2afxP27661 Thap2-203ENSMUST00000218989 527 ntBASIC14.04□□□□□ -0.16
H2afxP27661 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.04□□□□□ -0.16
H2afxP27661 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afxP27661 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afxP27661 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
H2afxP27661 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afxP27661 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
H2afxP27661 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
H2afxP27661 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afxP27661 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afxP27661 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
H2afxP27661 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afxP27661 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afxP27661 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afxP27661 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
H2afxP27661 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afxP27661 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
H2afxP27661 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afxP27661 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
H2afxP27661 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
H2afxP27661 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afxP27661 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
H2afxP27661 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afxP27661 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afxP27661 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
H2afxP27661 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
H2afxP27661 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afxP27661 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afxP27661 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afxP27661 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afxP27661 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afxP27661 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
H2afxP27661 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afxP27661 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.03□□□□□ -0.16
H2afxP27661 Gm9385-201ENSMUST00000117563 472 ntBASIC14.03□□□□□ -0.16
H2afxP27661 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.03□□□□□ -0.16
H2afxP27661 Gm27301-201ENSMUST00000184012 127 ntBASIC14.03□□□□□ -0.16
H2afxP27661 Gm37714-201ENSMUST00000194742 342 ntBASIC14.03□□□□□ -0.16
H2afxP27661 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.03□□□□□ -0.16
H2afxP27661 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.03□□□□□ -0.16
H2afxP27661 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afxP27661 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afxP27661 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afxP27661 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afxP27661 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afxP27661 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afxP27661 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afxP27661 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.03□□□□□ -0.16
H2afxP27661 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afxP27661 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afxP27661 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afxP27661 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
H2afxP27661 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afxP27661 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
H2afxP27661 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC14.03□□□□□ -0.16
H2afxP27661 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
H2afxP27661 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
H2afxP27661 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.03□□□□□ -0.16
H2afxP27661 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afxP27661 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afxP27661 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
H2afxP27661 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
H2afxP27661 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
H2afxP27661 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
H2afxP27661 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
H2afxP27661 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
H2afxP27661 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.02□□□□□ -0.16
H2afxP27661 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
H2afxP27661 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
H2afxP27661 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms