Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cd40lgP27548 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.48□□□□□ -0.41
Cd40lgP27548 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cd40lgP27548 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cd40lgP27548 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.48□□□□□ -0.41
Cd40lgP27548 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cd40lgP27548 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cd40lgP27548 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd40lgP27548 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd40lgP27548 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd40lgP27548 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.47□□□□□ -0.41
Cd40lgP27548 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.47□□□□□ -0.41
Cd40lgP27548 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd40lgP27548 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Cd40lgP27548 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cd40lgP27548 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Cd40lgP27548 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd40lgP27548 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd40lgP27548 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd40lgP27548 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.47□□□□□ -0.41
Cd40lgP27548 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd40lgP27548 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd40lgP27548 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd40lgP27548 Gm6912-201ENSMUST00000117218 544 ntBASIC12.47□□□□□ -0.41
Cd40lgP27548 Gm12859-201ENSMUST00000117834 427 ntBASIC12.47□□□□□ -0.41
Cd40lgP27548 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd40lgP27548 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
Cd40lgP27548 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd40lgP27548 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cd40lgP27548 Gm24420-201ENSMUST00000176676 59 ntBASIC12.47□□□□□ -0.41
Cd40lgP27548 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd40lgP27548 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.47□□□□□ -0.41
Cd40lgP27548 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cd40lgP27548 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cd40lgP27548 Gm18905-201ENSMUST00000205454 928 ntBASIC12.47□□□□□ -0.41
Cd40lgP27548 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.47□□□□□ -0.41
Cd40lgP27548 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Cd40lgP27548 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd40lgP27548 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd40lgP27548 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cd40lgP27548 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.47□□□□□ -0.41
Cd40lgP27548 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.47□□□□□ -0.41
Cd40lgP27548 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd40lgP27548 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd40lgP27548 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd40lgP27548 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd40lgP27548 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd40lgP27548 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Cd40lgP27548 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.47□□□□□ -0.41
Cd40lgP27548 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd40lgP27548 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cd40lgP27548 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cd40lgP27548 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cd40lgP27548 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd40lgP27548 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd40lgP27548 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd40lgP27548 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd40lgP27548 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd40lgP27548 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cd40lgP27548 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.46□□□□□ -0.41
Cd40lgP27548 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Cd40lgP27548 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cd40lgP27548 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cd40lgP27548 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.46□□□□□ -0.41
Cd40lgP27548 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cd40lgP27548 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cd40lgP27548 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cd40lgP27548 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
Cd40lgP27548 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cd40lgP27548 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cd40lgP27548 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cd40lgP27548 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.46□□□□□ -0.41
Cd40lgP27548 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.46□□□□□ -0.41
Cd40lgP27548 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.46□□□□□ -0.41
Cd40lgP27548 Gm21854-201ENSMUST00000179901 471 ntBASIC12.46□□□□□ -0.41
Cd40lgP27548 Gm8927-201ENSMUST00000181978 981 ntBASIC12.46□□□□□ -0.41
Cd40lgP27548 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.46□□□□□ -0.41
Cd40lgP27548 Gm42612-201ENSMUST00000197986 623 ntBASIC12.46□□□□□ -0.41
Cd40lgP27548 Gm43170-201ENSMUST00000199827 612 ntBASIC12.46□□□□□ -0.41
Cd40lgP27548 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.46□□□□□ -0.41
Cd40lgP27548 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.46□□□□□ -0.41
Cd40lgP27548 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Cd40lgP27548 Gm3222-201ENSMUST00000071282 990 ntBASIC12.46□□□□□ -0.41
Cd40lgP27548 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cd40lgP27548 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.46□□□□□ -0.41
Cd40lgP27548 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cd40lgP27548 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.46□□□□□ -0.41
Cd40lgP27548 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.46□□□□□ -0.41
Cd40lgP27548 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Cd40lgP27548 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cd40lgP27548 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cd40lgP27548 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cd40lgP27548 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cd40lgP27548 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cd40lgP27548 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cd40lgP27548 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Cd40lgP27548 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cd40lgP27548 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cd40lgP27548 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Cd40lgP27548 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms