Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdx1P18111 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdx1P18111 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Cdx1P18111 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdx1P18111 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdx1P18111 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdx1P18111 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdx1P18111 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdx1P18111 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cdx1P18111 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cdx1P18111 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cdx1P18111 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Cdx1P18111 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Cdx1P18111 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdx1P18111 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC10.92□□□□□ -0.66
Cdx1P18111 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdx1P18111 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdx1P18111 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdx1P18111 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdx1P18111 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdx1P18111 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdx1P18111 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdx1P18111 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC10.92□□□□□ -0.66
Cdx1P18111 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Cdx1P18111 Gm45630-201ENSMUST00000210243 1911 ntBASIC10.92□□□□□ -0.66
Cdx1P18111 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdx1P18111 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cdx1P18111 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdx1P18111 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdx1P18111 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdx1P18111 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdx1P18111 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdx1P18111 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC10.91□□□□□ -0.66
Cdx1P18111 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cdx1P18111 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cdx1P18111 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdx1P18111 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdx1P18111 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cdx1P18111 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Cdx1P18111 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Cdx1P18111 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cdx1P18111 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdx1P18111 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdx1P18111 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdx1P18111 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC10.91□□□□□ -0.66
Cdx1P18111 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Cdx1P18111 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Cdx1P18111 Mir449b-201ENSMUST00000104833 80 ntBASIC10.91□□□□□ -0.66
Cdx1P18111 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdx1P18111 Gm16198-201ENSMUST00000118766 670 ntBASIC10.91□□□□□ -0.66
Cdx1P18111 Gm12017-201ENSMUST00000122453 1003 ntBASIC10.91□□□□□ -0.66
Cdx1P18111 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cdx1P18111 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cdx1P18111 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cdx1P18111 Gm25948-201ENSMUST00000175334 112 ntBASIC10.91□□□□□ -0.66
Cdx1P18111 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC10.91□□□□□ -0.66
Cdx1P18111 Gm10253-201ENSMUST00000194270 940 ntBASIC10.91□□□□□ -0.66
Cdx1P18111 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Cdx1P18111 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC10.91□□□□□ -0.66
Cdx1P18111 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC10.91□□□□□ -0.66
Cdx1P18111 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC10.91□□□□□ -0.66
Cdx1P18111 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdx1P18111 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdx1P18111 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdx1P18111 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC10.91□□□□□ -0.66
Cdx1P18111 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdx1P18111 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Cdx1P18111 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdx1P18111 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdx1P18111 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdx1P18111 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cdx1P18111 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cdx1P18111 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdx1P18111 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Cdx1P18111 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC10.91□□□□□ -0.66
Cdx1P18111 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Cdx1P18111 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdx1P18111 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Cdx1P18111 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cdx1P18111 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cdx1P18111 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
Cdx1P18111 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC10.9□□□□□ -0.66
Cdx1P18111 Gm7901-201ENSMUST00000120430 1597 ntBASIC10.9□□□□□ -0.66
Cdx1P18111 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cdx1P18111 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cdx1P18111 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cdx1P18111 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cdx1P18111 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cdx1P18111 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cdx1P18111 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cdx1P18111 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC10.9□□□□□ -0.66
Cdx1P18111 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cdx1P18111 Gm22065-201ENSMUST00000103753 110 ntBASIC10.9□□□□□ -0.66
Cdx1P18111 Gm22066-201ENSMUST00000103761 110 ntBASIC10.9□□□□□ -0.66
Cdx1P18111 Gm24932-201ENSMUST00000103763 110 ntBASIC10.9□□□□□ -0.66
Cdx1P18111 Gm24115-201ENSMUST00000103799 110 ntBASIC10.9□□□□□ -0.66
Cdx1P18111 Gm22190-201ENSMUST00000103827 110 ntBASIC10.9□□□□□ -0.66
Cdx1P18111 Gm22191-201ENSMUST00000103831 110 ntBASIC10.9□□□□□ -0.66
Cdx1P18111 Gm25287-201ENSMUST00000103846 110 ntBASIC10.9□□□□□ -0.66
Cdx1P18111 Gm24721-201ENSMUST00000103849 110 ntBASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms