Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Cxcl1P12850 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcl1P12850 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcl1P12850 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcl1P12850 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcl1P12850 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcl1P12850 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcl1P12850 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcl1P12850 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
Cxcl1P12850 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl1P12850 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl1P12850 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl1P12850 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl1P12850 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl1P12850 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl1P12850 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl1P12850 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl1P12850 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
Cxcl1P12850 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Cxcl1P12850 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl1P12850 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.16□□□□□ -0.62
Cxcl1P12850 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl1P12850 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Cxcl1P12850 Gm15770-201ENSMUST00000117498 584 ntBASIC11.16□□□□□ -0.62
Cxcl1P12850 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl1P12850 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC11.16□□□□□ -0.62
Cxcl1P12850 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC11.16□□□□□ -0.62
Cxcl1P12850 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl1P12850 Gm4804-201ENSMUST00000182234 999 ntBASIC11.16□□□□□ -0.62
Cxcl1P12850 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl1P12850 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl1P12850 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl1P12850 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl1P12850 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC11.16□□□□□ -0.62
Cxcl1P12850 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Cxcl1P12850 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Cxcl1P12850 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC11.16□□□□□ -0.62
Cxcl1P12850 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.16□□□□□ -0.62
Cxcl1P12850 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl1P12850 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl1P12850 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Cxcl1P12850 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.16□□□□□ -0.62
Cxcl1P12850 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl1P12850 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl1P12850 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Cxcl1P12850 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl1P12850 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl1P12850 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.16□□□□□ -0.62
Cxcl1P12850 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl1P12850 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl1P12850 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl1P12850 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl1P12850 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl1P12850 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl1P12850 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl1P12850 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl1P12850 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.16□□□□□ -0.62
Cxcl1P12850 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.15□□□□□ -0.62
Cxcl1P12850 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Cxcl1P12850 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Cxcl1P12850 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cxcl1P12850 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cxcl1P12850 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.15□□□□□ -0.62
Cxcl1P12850 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Cxcl1P12850 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cxcl1P12850 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cxcl1P12850 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cxcl1P12850 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cxcl1P12850 Gm15653-201ENSMUST00000119247 907 ntBASIC11.15□□□□□ -0.62
Cxcl1P12850 Gm24420-201ENSMUST00000176676 59 ntBASIC11.15□□□□□ -0.62
Cxcl1P12850 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC11.15□□□□□ -0.62
Cxcl1P12850 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC11.15□□□□□ -0.62
Cxcl1P12850 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cxcl1P12850 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cxcl1P12850 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cxcl1P12850 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cxcl1P12850 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Cxcl1P12850 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Cxcl1P12850 Gm13859-201ENSMUST00000119936 1423 ntBASIC11.15□□□□□ -0.62
Cxcl1P12850 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cxcl1P12850 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cxcl1P12850 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cxcl1P12850 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cxcl1P12850 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cxcl1P12850 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cxcl1P12850 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cxcl1P12850 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cxcl1P12850 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Cxcl1P12850 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cxcl1P12850 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cxcl1P12850 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cxcl1P12850 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Cxcl1P12850 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cxcl1P12850 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Cxcl1P12850 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cxcl1P12850 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cxcl1P12850 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Cxcl1P12850 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cxcl1P12850 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.14□□□□□ -0.63
Cxcl1P12850 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms