Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Gm6254-201ENSMUST00000168178 1072 ntBASIC17.34■□□□□ 0.37
Hoxc9P09633 Gm6153-201ENSMUST00000172004 1058 ntBASIC17.34■□□□□ 0.37
Hoxc9P09633 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Hoxc9P09633 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Hoxc9P09633 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC17.34■□□□□ 0.37
Hoxc9P09633 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC17.34■□□□□ 0.37
Hoxc9P09633 Gm37466-201ENSMUST00000195692 652 ntBASIC17.34■□□□□ 0.37
Hoxc9P09633 Gm5641-202ENSMUST00000198699 1080 ntBASIC17.34■□□□□ 0.37
Hoxc9P09633 Gm44207-201ENSMUST00000204568 1424 ntBASIC17.34■□□□□ 0.37
Hoxc9P09633 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC17.34■□□□□ 0.37
Hoxc9P09633 Gm6082-201ENSMUST00000215204 454 ntBASIC17.34■□□□□ 0.37
Hoxc9P09633 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Hoxc9P09633 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxc9P09633 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Hoxc9P09633 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxc9P09633 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxc9P09633 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Hoxc9P09633 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxc9P09633 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxc9P09633 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hoxc9P09633 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Hoxc9P09633 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hoxc9P09633 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hoxc9P09633 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Hoxc9P09633 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hoxc9P09633 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Hoxc9P09633 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hoxc9P09633 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.37
Hoxc9P09633 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hoxc9P09633 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.33■□□□□ 0.36
Hoxc9P09633 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Hoxc9P09633 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC17.33■□□□□ 0.36
Hoxc9P09633 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC17.33■□□□□ 0.36
Hoxc9P09633 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Hoxc9P09633 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxc9P09633 Gm20482-202ENSMUST00000174729 825 ntBASIC17.33■□□□□ 0.36
Hoxc9P09633 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Hoxc9P09633 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC17.33■□□□□ 0.36
Hoxc9P09633 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC17.33■□□□□ 0.36
Hoxc9P09633 AC135669.1-202ENSMUST00000216742 540 ntBASIC17.33■□□□□ 0.36
Hoxc9P09633 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Hoxc9P09633 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxc9P09633 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC17.33■□□□□ 0.36
Hoxc9P09633 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxc9P09633 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxc9P09633 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Hoxc9P09633 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Hoxc9P09633 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxc9P09633 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxc9P09633 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxc9P09633 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
Hoxc9P09633 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxc9P09633 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxc9P09633 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxc9P09633 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxc9P09633 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Hoxc9P09633 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxc9P09633 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxc9P09633 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxc9P09633 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxc9P09633 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxc9P09633 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxc9P09633 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC17.32■□□□□ 0.36
Hoxc9P09633 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Hoxc9P09633 AC069562.3-201ENSMUST00000225387 587 ntBASIC17.32■□□□□ 0.36
Hoxc9P09633 CT025533.2-201ENSMUST00000228715 1248 ntBASIC17.32■□□□□ 0.36
Hoxc9P09633 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Hoxc9P09633 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxc9P09633 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Hoxc9P09633 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Hoxc9P09633 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Hoxc9P09633 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxc9P09633 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxc9P09633 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC17.32■□□□□ 0.36
Hoxc9P09633 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxc9P09633 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxc9P09633 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Hoxc9P09633 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxc9P09633 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxc9P09633 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxc9P09633 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxc9P09633 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxc9P09633 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxc9P09633 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC17.31■□□□□ 0.36
Hoxc9P09633 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC17.31■□□□□ 0.36
Hoxc9P09633 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC17.31■□□□□ 0.36
Hoxc9P09633 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC17.31■□□□□ 0.36
Hoxc9P09633 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC17.31■□□□□ 0.36
Hoxc9P09633 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Hoxc9P09633 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Hoxc9P09633 Gm9176-201ENSMUST00000219955 1120 ntBASIC17.31■□□□□ 0.36
Hoxc9P09633 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxc9P09633 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxc9P09633 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxc9P09633 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxc9P09633 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxc9P09633 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxc9P09633 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxc9P09633 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxc9P09633 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms