Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ApoeP08226 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.76□□□□□ -0.37
ApoeP08226 Mir3113-201ENSMUST00000175478 76 ntBASIC12.76□□□□□ -0.37
ApoeP08226 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.76□□□□□ -0.37
ApoeP08226 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.76□□□□□ -0.37
ApoeP08226 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ApoeP08226 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ApoeP08226 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ApoeP08226 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ApoeP08226 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ApoeP08226 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ApoeP08226 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
ApoeP08226 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ApoeP08226 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ApoeP08226 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ApoeP08226 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ApoeP08226 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ApoeP08226 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ApoeP08226 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ApoeP08226 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ApoeP08226 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
ApoeP08226 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.76□□□□□ -0.37
ApoeP08226 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ApoeP08226 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ApoeP08226 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.76□□□□□ -0.37
ApoeP08226 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ApoeP08226 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ApoeP08226 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ApoeP08226 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
ApoeP08226 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ApoeP08226 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.75□□□□□ -0.37
ApoeP08226 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
ApoeP08226 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
ApoeP08226 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
ApoeP08226 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ApoeP08226 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
ApoeP08226 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ApoeP08226 Gm5566-201ENSMUST00000116118 459 ntBASIC12.75□□□□□ -0.37
ApoeP08226 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ApoeP08226 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.75□□□□□ -0.37
ApoeP08226 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
ApoeP08226 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ApoeP08226 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ApoeP08226 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ApoeP08226 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
ApoeP08226 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
ApoeP08226 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ApoeP08226 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ApoeP08226 Gm6916-202ENSMUST00000205523 195 ntBASIC12.75□□□□□ -0.37
ApoeP08226 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
ApoeP08226 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.75□□□□□ -0.37
ApoeP08226 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.75□□□□□ -0.37
ApoeP08226 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ApoeP08226 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ApoeP08226 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ApoeP08226 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ApoeP08226 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ApoeP08226 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ApoeP08226 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
ApoeP08226 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ApoeP08226 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
ApoeP08226 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
ApoeP08226 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ApoeP08226 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ApoeP08226 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.75□□□□□ -0.37
ApoeP08226 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
ApoeP08226 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ApoeP08226 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.74□□□□□ -0.37
ApoeP08226 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ApoeP08226 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ApoeP08226 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.74□□□□□ -0.37
ApoeP08226 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ApoeP08226 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
ApoeP08226 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.74□□□□□ -0.37
ApoeP08226 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ApoeP08226 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ApoeP08226 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ApoeP08226 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.74□□□□□ -0.37
ApoeP08226 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ApoeP08226 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
ApoeP08226 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ApoeP08226 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ApoeP08226 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
ApoeP08226 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.74□□□□□ -0.37
ApoeP08226 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.74□□□□□ -0.37
ApoeP08226 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ApoeP08226 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ApoeP08226 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ApoeP08226 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ApoeP08226 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
ApoeP08226 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
ApoeP08226 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ApoeP08226 Rprl2-201ENSMUST00000157150 290 ntBASIC12.74□□□□□ -0.37
ApoeP08226 Gm9719-201ENSMUST00000162765 543 ntBASIC12.74□□□□□ -0.37
ApoeP08226 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ApoeP08226 Paupar-201ENSMUST00000194826 3482 ntBASIC12.74□□□□□ -0.37
ApoeP08226 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
ApoeP08226 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.74□□□□□ -0.37
ApoeP08226 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ApoeP08226 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms