Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TnfP06804 Gm7553-201ENSMUST00000185805 1426 ntBASIC14.27□□□□□ -0.12
TnfP06804 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TnfP06804 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TnfP06804 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TnfP06804 Gm6447-201ENSMUST00000118905 835 ntBASIC14.27□□□□□ -0.13
TnfP06804 Gm13369-201ENSMUST00000119442 987 ntBASIC14.27□□□□□ -0.13
TnfP06804 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TnfP06804 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14.27□□□□□ -0.13
TnfP06804 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TnfP06804 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC14.27□□□□□ -0.13
TnfP06804 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC14.27□□□□□ -0.13
TnfP06804 Gm43630-201ENSMUST00000201550 776 ntBASIC14.27□□□□□ -0.13
TnfP06804 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC14.27□□□□□ -0.13
TnfP06804 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TnfP06804 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TnfP06804 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TnfP06804 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
TnfP06804 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TnfP06804 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
TnfP06804 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TnfP06804 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TnfP06804 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TnfP06804 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
TnfP06804 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
TnfP06804 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TnfP06804 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.27□□□□□ -0.13
TnfP06804 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TnfP06804 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TnfP06804 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC14.26□□□□□ -0.13
TnfP06804 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TnfP06804 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
TnfP06804 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TnfP06804 Gm9200-201ENSMUST00000118513 1354 ntBASIC14.26□□□□□ -0.13
TnfP06804 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.26□□□□□ -0.13
TnfP06804 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TnfP06804 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TnfP06804 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TnfP06804 Gm8565-201ENSMUST00000183259 1014 ntBASIC14.26□□□□□ -0.13
TnfP06804 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TnfP06804 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TnfP06804 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC14.26□□□□□ -0.13
TnfP06804 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TnfP06804 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.26□□□□□ -0.13
TnfP06804 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.26□□□□□ -0.13
TnfP06804 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
TnfP06804 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TnfP06804 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TnfP06804 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TnfP06804 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TnfP06804 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
TnfP06804 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TnfP06804 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TnfP06804 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TnfP06804 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TnfP06804 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
TnfP06804 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TnfP06804 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TnfP06804 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TnfP06804 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TnfP06804 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
TnfP06804 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TnfP06804 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TnfP06804 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TnfP06804 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TnfP06804 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TnfP06804 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TnfP06804 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC14.25□□□□□ -0.13
TnfP06804 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
TnfP06804 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TnfP06804 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC14.25□□□□□ -0.13
TnfP06804 Gm37424-201ENSMUST00000191727 561 ntBASIC14.25□□□□□ -0.13
TnfP06804 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC14.25□□□□□ -0.13
TnfP06804 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.25□□□□□ -0.13
TnfP06804 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TnfP06804 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
TnfP06804 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TnfP06804 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TnfP06804 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TnfP06804 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TnfP06804 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TnfP06804 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TnfP06804 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
TnfP06804 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.24□□□□□ -0.13
TnfP06804 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TnfP06804 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TnfP06804 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TnfP06804 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TnfP06804 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TnfP06804 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TnfP06804 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.24□□□□□ -0.13
TnfP06804 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TnfP06804 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TnfP06804 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TnfP06804 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TnfP06804 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TnfP06804 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TnfP06804 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TnfP06804 Gm11618-201ENSMUST00000117946 267 ntBASIC14.24□□□□□ -0.13
TnfP06804 Gm2639-201ENSMUST00000156881 1297 ntBASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms