Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CopeO89079 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CopeO89079 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CopeO89079 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CopeO89079 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CopeO89079 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CopeO89079 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CopeO89079 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CopeO89079 Gm13385-201ENSMUST00000121089 220 ntBASIC13.91□□□□□ -0.18
CopeO89079 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CopeO89079 Gm25911-201ENSMUST00000157621 56 ntBASIC13.91□□□□□ -0.18
CopeO89079 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CopeO89079 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CopeO89079 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.91□□□□□ -0.18
CopeO89079 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CopeO89079 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CopeO89079 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CopeO89079 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
CopeO89079 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CopeO89079 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CopeO89079 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.91□□□□□ -0.18
CopeO89079 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CopeO89079 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CopeO89079 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CopeO89079 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CopeO89079 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.91□□□□□ -0.18
CopeO89079 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.9□□□□□ -0.18
CopeO89079 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CopeO89079 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CopeO89079 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CopeO89079 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CopeO89079 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CopeO89079 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CopeO89079 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CopeO89079 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CopeO89079 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.9□□□□□ -0.18
CopeO89079 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CopeO89079 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CopeO89079 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.9□□□□□ -0.18
CopeO89079 Gm24158-201ENSMUST00000175263 71 ntBASIC13.9□□□□□ -0.18
CopeO89079 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
CopeO89079 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.9□□□□□ -0.18
CopeO89079 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CopeO89079 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CopeO89079 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CopeO89079 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CopeO89079 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CopeO89079 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CopeO89079 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CopeO89079 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CopeO89079 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CopeO89079 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CopeO89079 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CopeO89079 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CopeO89079 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CopeO89079 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CopeO89079 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
CopeO89079 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.9□□□□□ -0.19
CopeO89079 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
CopeO89079 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.19
CopeO89079 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CopeO89079 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CopeO89079 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CopeO89079 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CopeO89079 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CopeO89079 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CopeO89079 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CopeO89079 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CopeO89079 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CopeO89079 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CopeO89079 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CopeO89079 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.89□□□□□ -0.19
CopeO89079 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.89□□□□□ -0.19
CopeO89079 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CopeO89079 Gm22065-201ENSMUST00000103753 110 ntBASIC13.89□□□□□ -0.19
CopeO89079 Gm22066-201ENSMUST00000103761 110 ntBASIC13.89□□□□□ -0.19
CopeO89079 Gm24932-201ENSMUST00000103763 110 ntBASIC13.89□□□□□ -0.19
CopeO89079 Gm24115-201ENSMUST00000103799 110 ntBASIC13.89□□□□□ -0.19
CopeO89079 Gm22190-201ENSMUST00000103827 110 ntBASIC13.89□□□□□ -0.19
CopeO89079 Gm22191-201ENSMUST00000103831 110 ntBASIC13.89□□□□□ -0.19
CopeO89079 Gm24721-201ENSMUST00000103849 110 ntBASIC13.89□□□□□ -0.19
CopeO89079 Gm28018-201ENSMUST00000103869 110 ntBASIC13.89□□□□□ -0.19
CopeO89079 Gm26399-201ENSMUST00000103937 110 ntBASIC13.89□□□□□ -0.19
CopeO89079 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CopeO89079 Gm15678-201ENSMUST00000117573 960 ntBASIC13.89□□□□□ -0.19
CopeO89079 Gm15653-201ENSMUST00000119247 907 ntBASIC13.89□□□□□ -0.19
CopeO89079 Gm25349-201ENSMUST00000177728 110 ntBASIC13.89□□□□□ -0.19
CopeO89079 Gm23616-201ENSMUST00000177797 110 ntBASIC13.89□□□□□ -0.19
CopeO89079 Gm25871-201ENSMUST00000177816 110 ntBASIC13.89□□□□□ -0.19
CopeO89079 Gm24752-201ENSMUST00000178240 110 ntBASIC13.89□□□□□ -0.19
CopeO89079 Gm24496-201ENSMUST00000178287 110 ntBASIC13.89□□□□□ -0.19
CopeO89079 Gm25649-201ENSMUST00000178476 110 ntBASIC13.89□□□□□ -0.19
CopeO89079 Gm25548-201ENSMUST00000178681 110 ntBASIC13.89□□□□□ -0.19
CopeO89079 Gm23147-201ENSMUST00000178841 110 ntBASIC13.89□□□□□ -0.19
CopeO89079 Gm26095-201ENSMUST00000179270 110 ntBASIC13.89□□□□□ -0.19
CopeO89079 Gm22171-201ENSMUST00000179283 110 ntBASIC13.89□□□□□ -0.19
CopeO89079 Gm23936-201ENSMUST00000179354 110 ntBASIC13.89□□□□□ -0.19
CopeO89079 Gm22619-201ENSMUST00000179516 110 ntBASIC13.89□□□□□ -0.19
CopeO89079 Gm25255-201ENSMUST00000179579 110 ntBASIC13.89□□□□□ -0.19
CopeO89079 Gm24755-201ENSMUST00000179691 110 ntBASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms