Protein–RNA interactions for Protein: O88879

Apaf1, Apoptotic protease-activating factor 1, mousemouse

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apaf1O88879 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Apaf1O88879 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Apaf1O88879 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Apaf1O88879 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Apaf1O88879 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Apaf1O88879 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC17.5■□□□□ 0.39
Apaf1O88879 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Apaf1O88879 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Apaf1O88879 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Apaf1O88879 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Apaf1O88879 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC17.5■□□□□ 0.39
Apaf1O88879 Gm6447-201ENSMUST00000118905 835 ntBASIC17.5■□□□□ 0.39
Apaf1O88879 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Apaf1O88879 Gm8810-201ENSMUST00000172895 754 ntBASIC17.5■□□□□ 0.39
Apaf1O88879 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC17.5■□□□□ 0.39
Apaf1O88879 Gm27486-201ENSMUST00000184923 80 ntBASIC17.5■□□□□ 0.39
Apaf1O88879 Gm9124-201ENSMUST00000191789 1092 ntBASIC17.5■□□□□ 0.39
Apaf1O88879 Gm9113-201ENSMUST00000192510 1018 ntBASIC17.5■□□□□ 0.39
Apaf1O88879 Gm9131-201ENSMUST00000193557 1089 ntBASIC17.5■□□□□ 0.39
Apaf1O88879 Gm9121-201ENSMUST00000193749 1071 ntBASIC17.5■□□□□ 0.39
Apaf1O88879 Gm6266-201ENSMUST00000203844 806 ntBASIC17.5■□□□□ 0.39
Apaf1O88879 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Apaf1O88879 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Apaf1O88879 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Apaf1O88879 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Apaf1O88879 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Apaf1O88879 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Apaf1O88879 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Apaf1O88879 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Apaf1O88879 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Apaf1O88879 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Apaf1O88879 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Apaf1O88879 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Apaf1O88879 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Apaf1O88879 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Apaf1O88879 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Apaf1O88879 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Apaf1O88879 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Apaf1O88879 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Apaf1O88879 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Apaf1O88879 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Apaf1O88879 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Apaf1O88879 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Apaf1O88879 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Apaf1O88879 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Apaf1O88879 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Apaf1O88879 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Apaf1O88879 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC17.49■□□□□ 0.39
Apaf1O88879 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Apaf1O88879 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Apaf1O88879 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Apaf1O88879 Gm43433-201ENSMUST00000196573 481 ntBASIC17.49■□□□□ 0.39
Apaf1O88879 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Apaf1O88879 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Apaf1O88879 Abhd6-203ENSMUST00000225234 1958 ntBASIC17.49■□□□□ 0.39
Apaf1O88879 Gm18630-201ENSMUST00000222109 1397 ntBASIC17.49■□□□□ 0.39
Apaf1O88879 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Apaf1O88879 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Apaf1O88879 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Apaf1O88879 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Apaf1O88879 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Apaf1O88879 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Apaf1O88879 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Apaf1O88879 AC154262.2-201ENSMUST00000224310 2293 ntBASIC17.49■□□□□ 0.39
Apaf1O88879 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Apaf1O88879 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC17.48■□□□□ 0.39
Apaf1O88879 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Apaf1O88879 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC17.48■□□□□ 0.39
Apaf1O88879 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Apaf1O88879 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Apaf1O88879 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Apaf1O88879 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Apaf1O88879 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Apaf1O88879 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Apaf1O88879 Gm14350-201ENSMUST00000116642 640 ntBASIC17.48■□□□□ 0.39
Apaf1O88879 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC17.48■□□□□ 0.39
Apaf1O88879 Gm24196-201ENSMUST00000179161 110 ntBASIC17.48■□□□□ 0.39
Apaf1O88879 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Apaf1O88879 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Apaf1O88879 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC17.48■□□□□ 0.39
Apaf1O88879 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Apaf1O88879 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Apaf1O88879 Gm25857-201ENSMUST00000082788 129 ntBASIC17.48■□□□□ 0.39
Apaf1O88879 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Apaf1O88879 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Apaf1O88879 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Apaf1O88879 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Apaf1O88879 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Apaf1O88879 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Apaf1O88879 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Apaf1O88879 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Apaf1O88879 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Apaf1O88879 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC17.48■□□□□ 0.39
Apaf1O88879 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Apaf1O88879 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Apaf1O88879 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Apaf1O88879 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Apaf1O88879 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Apaf1O88879 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Apaf1O88879 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms