Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hcn1O88704 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Hcn1O88704 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hcn1O88704 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hcn1O88704 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hcn1O88704 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Hcn1O88704 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hcn1O88704 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.94□□□□□ -0.34
Hcn1O88704 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hcn1O88704 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Hcn1O88704 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Hcn1O88704 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hcn1O88704 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hcn1O88704 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hcn1O88704 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hcn1O88704 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hcn1O88704 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Hcn1O88704 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Hcn1O88704 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Hcn1O88704 Gm21470-201ENSMUST00000187680 696 ntBASIC12.94□□□□□ -0.34
Hcn1O88704 Gm37714-201ENSMUST00000194742 342 ntBASIC12.94□□□□□ -0.34
Hcn1O88704 Gm44855-201ENSMUST00000205725 362 ntBASIC12.94□□□□□ -0.34
Hcn1O88704 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hcn1O88704 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hcn1O88704 Gm18027-201ENSMUST00000218947 619 ntBASIC12.94□□□□□ -0.34
Hcn1O88704 Gm2423-201ENSMUST00000074863 733 ntBASIC12.94□□□□□ -0.34
Hcn1O88704 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hcn1O88704 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hcn1O88704 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hcn1O88704 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hcn1O88704 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Hcn1O88704 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hcn1O88704 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hcn1O88704 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.94□□□□□ -0.34
Hcn1O88704 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hcn1O88704 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hcn1O88704 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hcn1O88704 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hcn1O88704 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.94□□□□□ -0.34
Hcn1O88704 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hcn1O88704 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Hcn1O88704 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hcn1O88704 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hcn1O88704 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.94□□□□□ -0.34
Hcn1O88704 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hcn1O88704 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.94□□□□□ -0.34
Hcn1O88704 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hcn1O88704 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Hcn1O88704 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Hcn1O88704 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hcn1O88704 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Hcn1O88704 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Hcn1O88704 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Hcn1O88704 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.93□□□□□ -0.34
Hcn1O88704 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hcn1O88704 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hcn1O88704 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hcn1O88704 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hcn1O88704 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hcn1O88704 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Hcn1O88704 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hcn1O88704 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hcn1O88704 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hcn1O88704 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.93□□□□□ -0.34
Hcn1O88704 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.93□□□□□ -0.34
Hcn1O88704 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hcn1O88704 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hcn1O88704 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.93□□□□□ -0.34
Hcn1O88704 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.93□□□□□ -0.34
Hcn1O88704 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hcn1O88704 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hcn1O88704 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hcn1O88704 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hcn1O88704 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hcn1O88704 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hcn1O88704 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hcn1O88704 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Hcn1O88704 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hcn1O88704 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hcn1O88704 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Hcn1O88704 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.93□□□□□ -0.34
Hcn1O88704 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hcn1O88704 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hcn1O88704 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hcn1O88704 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.93□□□□□ -0.34
Hcn1O88704 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Hcn1O88704 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hcn1O88704 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hcn1O88704 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hcn1O88704 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Hcn1O88704 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Hcn1O88704 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hcn1O88704 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Hcn1O88704 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hcn1O88704 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hcn1O88704 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.92□□□□□ -0.34
Hcn1O88704 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hcn1O88704 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Hcn1O88704 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Hcn1O88704 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms