Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
ClppO88696 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClppO88696 Gm24420-201ENSMUST00000176676 59 ntBASIC13.23□□□□□ -0.29
ClppO88696 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClppO88696 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClppO88696 Gm43438-201ENSMUST00000198133 379 ntBASIC13.23□□□□□ -0.29
ClppO88696 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClppO88696 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
ClppO88696 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClppO88696 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
ClppO88696 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClppO88696 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
ClppO88696 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClppO88696 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
ClppO88696 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClppO88696 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ClppO88696 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClppO88696 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClppO88696 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
ClppO88696 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClppO88696 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClppO88696 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClppO88696 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.23□□□□□ -0.29
ClppO88696 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClppO88696 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ClppO88696 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.23□□□□□ -0.29
ClppO88696 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClppO88696 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClppO88696 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClppO88696 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ClppO88696 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClppO88696 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClppO88696 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
ClppO88696 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClppO88696 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClppO88696 Gm44086-201ENSMUST00000203251 2349 ntBASIC13.22□□□□□ -0.29
ClppO88696 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClppO88696 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClppO88696 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ClppO88696 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClppO88696 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ClppO88696 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.22□□□□□ -0.29
ClppO88696 Gm27772-201ENSMUST00000184900 187 ntBASIC13.22□□□□□ -0.29
ClppO88696 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
ClppO88696 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClppO88696 Gm17794-201ENSMUST00000220252 955 ntBASIC13.22□□□□□ -0.29
ClppO88696 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ClppO88696 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClppO88696 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClppO88696 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClppO88696 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ClppO88696 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClppO88696 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClppO88696 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClppO88696 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ClppO88696 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.22□□□□□ -0.29
ClppO88696 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClppO88696 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClppO88696 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClppO88696 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClppO88696 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.21□□□□□ -0.29
ClppO88696 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
ClppO88696 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
ClppO88696 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ClppO88696 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ClppO88696 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ClppO88696 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
ClppO88696 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
ClppO88696 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ClppO88696 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
ClppO88696 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ClppO88696 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.21□□□□□ -0.29
ClppO88696 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ClppO88696 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
ClppO88696 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.21□□□□□ -0.29
ClppO88696 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
ClppO88696 Gm15824-201ENSMUST00000119516 955 ntBASIC13.21□□□□□ -0.29
ClppO88696 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.21□□□□□ -0.29
ClppO88696 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.21□□□□□ -0.29
ClppO88696 Gm18062-201ENSMUST00000208020 547 ntBASIC13.21□□□□□ -0.29
ClppO88696 Gm18055-201ENSMUST00000208254 547 ntBASIC13.21□□□□□ -0.29
ClppO88696 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ClppO88696 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ClppO88696 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ClppO88696 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ClppO88696 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ClppO88696 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ClppO88696 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ClppO88696 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.21□□□□□ -0.29
ClppO88696 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
ClppO88696 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ClppO88696 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
ClppO88696 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
ClppO88696 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
ClppO88696 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
ClppO88696 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.3
ClppO88696 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
ClppO88696 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
ClppO88696 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
ClppO88696 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.21□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms