Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lmx1bO88609 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lmx1bO88609 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lmx1bO88609 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lmx1bO88609 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lmx1bO88609 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lmx1bO88609 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lmx1bO88609 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.23□□□□□ -0.45
Lmx1bO88609 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lmx1bO88609 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lmx1bO88609 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lmx1bO88609 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lmx1bO88609 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lmx1bO88609 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lmx1bO88609 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lmx1bO88609 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lmx1bO88609 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Lmx1bO88609 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lmx1bO88609 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.23□□□□□ -0.45
Lmx1bO88609 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lmx1bO88609 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.23□□□□□ -0.45
Lmx1bO88609 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.23□□□□□ -0.45
Lmx1bO88609 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lmx1bO88609 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lmx1bO88609 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.23□□□□□ -0.45
Lmx1bO88609 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lmx1bO88609 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.23□□□□□ -0.45
Lmx1bO88609 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.23□□□□□ -0.45
Lmx1bO88609 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lmx1bO88609 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lmx1bO88609 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.23□□□□□ -0.45
Lmx1bO88609 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lmx1bO88609 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lmx1bO88609 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Lmx1bO88609 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lmx1bO88609 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Lmx1bO88609 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lmx1bO88609 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lmx1bO88609 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lmx1bO88609 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lmx1bO88609 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lmx1bO88609 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lmx1bO88609 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lmx1bO88609 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lmx1bO88609 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lmx1bO88609 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lmx1bO88609 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.22□□□□□ -0.45
Lmx1bO88609 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lmx1bO88609 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.22□□□□□ -0.45
Lmx1bO88609 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lmx1bO88609 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Lmx1bO88609 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lmx1bO88609 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lmx1bO88609 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Lmx1bO88609 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lmx1bO88609 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.22□□□□□ -0.45
Lmx1bO88609 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lmx1bO88609 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lmx1bO88609 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lmx1bO88609 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lmx1bO88609 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.22□□□□□ -0.45
Lmx1bO88609 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.22□□□□□ -0.45
Lmx1bO88609 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lmx1bO88609 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.22□□□□□ -0.45
Lmx1bO88609 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lmx1bO88609 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Lmx1bO88609 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lmx1bO88609 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Lmx1bO88609 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lmx1bO88609 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lmx1bO88609 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lmx1bO88609 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lmx1bO88609 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lmx1bO88609 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lmx1bO88609 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lmx1bO88609 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lmx1bO88609 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.22□□□□□ -0.45
Lmx1bO88609 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.22□□□□□ -0.45
Lmx1bO88609 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.22□□□□□ -0.45
Lmx1bO88609 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lmx1bO88609 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lmx1bO88609 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lmx1bO88609 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lmx1bO88609 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lmx1bO88609 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Lmx1bO88609 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lmx1bO88609 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Lmx1bO88609 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Lmx1bO88609 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lmx1bO88609 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lmx1bO88609 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lmx1bO88609 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Lmx1bO88609 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lmx1bO88609 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lmx1bO88609 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lmx1bO88609 Gm12390-201ENSMUST00000117897 397 ntBASIC12.21□□□□□ -0.45
Lmx1bO88609 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.21□□□□□ -0.45
Lmx1bO88609 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.21□□□□□ -0.45
Lmx1bO88609 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.21□□□□□ -0.45
Lmx1bO88609 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms