Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.23□□□□□ -0.45
Rnf13O54965 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf13O54965 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Rnf13O54965 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.23□□□□□ -0.45
Rnf13O54965 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf13O54965 Gm29541-201ENSMUST00000191351 678 ntBASIC12.23□□□□□ -0.45
Rnf13O54965 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf13O54965 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf13O54965 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.23□□□□□ -0.45
Rnf13O54965 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Rnf13O54965 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf13O54965 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Rnf13O54965 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf13O54965 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.23□□□□□ -0.45
Rnf13O54965 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf13O54965 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf13O54965 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf13O54965 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf13O54965 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Rnf13O54965 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf13O54965 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf13O54965 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf13O54965 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf13O54965 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.23□□□□□ -0.45
Rnf13O54965 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf13O54965 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf13O54965 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf13O54965 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf13O54965 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.22□□□□□ -0.45
Rnf13O54965 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf13O54965 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf13O54965 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf13O54965 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Rnf13O54965 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Rnf13O54965 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf13O54965 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf13O54965 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf13O54965 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf13O54965 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf13O54965 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf13O54965 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf13O54965 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Rnf13O54965 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf13O54965 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf13O54965 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.22□□□□□ -0.45
Rnf13O54965 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf13O54965 Gm16476-201ENSMUST00000221544 139 ntBASIC12.22□□□□□ -0.45
Rnf13O54965 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.22□□□□□ -0.45
Rnf13O54965 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rnf13O54965 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf13O54965 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf13O54965 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf13O54965 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Rnf13O54965 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf13O54965 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.22□□□□□ -0.45
Rnf13O54965 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf13O54965 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf13O54965 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rnf13O54965 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf13O54965 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf13O54965 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Rnf13O54965 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rnf13O54965 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf13O54965 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.22□□□□□ -0.45
Rnf13O54965 Syt7-205ENSMUST00000224135 1557 ntBASIC12.22□□□□□ -0.45
Rnf13O54965 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Rnf13O54965 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf13O54965 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.22□□□□□ -0.45
Rnf13O54965 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf13O54965 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf13O54965 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf13O54965 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf13O54965 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf13O54965 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf13O54965 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf13O54965 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf13O54965 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Rnf13O54965 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf13O54965 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.21□□□□□ -0.45
Rnf13O54965 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf13O54965 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf13O54965 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Rnf13O54965 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf13O54965 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf13O54965 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf13O54965 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf13O54965 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf13O54965 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf13O54965 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.21□□□□□ -0.45
Rnf13O54965 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.21□□□□□ -0.45
Rnf13O54965 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf13O54965 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.21□□□□□ -0.45
Rnf13O54965 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.21□□□□□ -0.45
Rnf13O54965 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC12.21□□□□□ -0.45
Rnf13O54965 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.21□□□□□ -0.45
Rnf13O54965 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf13O54965 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Rnf13O54965 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf13O54965 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Rnf13O54965 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms