Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Itgb3O54890 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Itgb3O54890 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14.28□□□□□ -0.12
Itgb3O54890 Gm8598-201ENSMUST00000221184 836 ntBASIC14.28□□□□□ -0.12
Itgb3O54890 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.28□□□□□ -0.12
Itgb3O54890 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Itgb3O54890 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Itgb3O54890 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Itgb3O54890 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Itgb3O54890 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Itgb3O54890 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Itgb3O54890 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Itgb3O54890 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.28□□□□□ -0.12
Itgb3O54890 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Itgb3O54890 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
Itgb3O54890 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Itgb3O54890 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Itgb3O54890 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Itgb3O54890 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Itgb3O54890 Acot6-202ENSMUST00000222921 3622 ntBASIC14.28□□□□□ -0.12
Itgb3O54890 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Itgb3O54890 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Itgb3O54890 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.28□□□□□ -0.12
Itgb3O54890 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Itgb3O54890 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
Itgb3O54890 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Itgb3O54890 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Itgb3O54890 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Itgb3O54890 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Itgb3O54890 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Itgb3O54890 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.27□□□□□ -0.12
Itgb3O54890 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Itgb3O54890 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Itgb3O54890 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.27□□□□□ -0.12
Itgb3O54890 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.27□□□□□ -0.13
Itgb3O54890 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC14.27□□□□□ -0.13
Itgb3O54890 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Itgb3O54890 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Itgb3O54890 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Itgb3O54890 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.27□□□□□ -0.13
Itgb3O54890 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Itgb3O54890 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Itgb3O54890 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Itgb3O54890 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Itgb3O54890 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Itgb3O54890 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Itgb3O54890 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.27□□□□□ -0.13
Itgb3O54890 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Itgb3O54890 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Itgb3O54890 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Itgb3O54890 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Itgb3O54890 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Itgb3O54890 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Itgb3O54890 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Itgb3O54890 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Itgb3O54890 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.26□□□□□ -0.13
Itgb3O54890 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Itgb3O54890 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Itgb3O54890 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Itgb3O54890 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Itgb3O54890 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Itgb3O54890 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Itgb3O54890 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Itgb3O54890 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Itgb3O54890 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Itgb3O54890 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC14.26□□□□□ -0.13
Itgb3O54890 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Itgb3O54890 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Itgb3O54890 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.26□□□□□ -0.13
Itgb3O54890 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Itgb3O54890 Gm12390-201ENSMUST00000117897 397 ntBASIC14.26□□□□□ -0.13
Itgb3O54890 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.26□□□□□ -0.13
Itgb3O54890 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC14.26□□□□□ -0.13
Itgb3O54890 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Itgb3O54890 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.26□□□□□ -0.13
Itgb3O54890 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Itgb3O54890 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Itgb3O54890 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.26□□□□□ -0.13
Itgb3O54890 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.26□□□□□ -0.13
Itgb3O54890 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.26□□□□□ -0.13
Itgb3O54890 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.26□□□□□ -0.13
Itgb3O54890 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.26□□□□□ -0.13
Itgb3O54890 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Itgb3O54890 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.26□□□□□ -0.13
Itgb3O54890 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Itgb3O54890 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Itgb3O54890 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Itgb3O54890 Gm10012-201ENSMUST00000078252 192 ntBASIC14.26□□□□□ -0.13
Itgb3O54890 Gm25857-201ENSMUST00000082788 129 ntBASIC14.26□□□□□ -0.13
Itgb3O54890 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Itgb3O54890 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Itgb3O54890 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Itgb3O54890 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Itgb3O54890 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.26□□□□□ -0.13
Itgb3O54890 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Itgb3O54890 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Itgb3O54890 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Itgb3O54890 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Itgb3O54890 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Itgb3O54890 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms