Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Efnb3O35393 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC10.67□□□□□ -0.7
Efnb3O35393 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Efnb3O35393 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC10.67□□□□□ -0.7
Efnb3O35393 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Efnb3O35393 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Efnb3O35393 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Efnb3O35393 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Efnb3O35393 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Efnb3O35393 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Efnb3O35393 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC10.67□□□□□ -0.7
Efnb3O35393 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Efnb3O35393 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC10.67□□□□□ -0.7
Efnb3O35393 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC10.67□□□□□ -0.7
Efnb3O35393 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Efnb3O35393 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Efnb3O35393 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC10.67□□□□□ -0.7
Efnb3O35393 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC10.67□□□□□ -0.7
Efnb3O35393 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Efnb3O35393 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Efnb3O35393 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Efnb3O35393 Gm5648-201ENSMUST00000122244 1587 ntBASIC10.67□□□□□ -0.7
Efnb3O35393 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC10.67□□□□□ -0.7
Efnb3O35393 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Efnb3O35393 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Efnb3O35393 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Efnb3O35393 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
Efnb3O35393 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Efnb3O35393 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Efnb3O35393 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Efnb3O35393 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Efnb3O35393 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Efnb3O35393 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Efnb3O35393 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Efnb3O35393 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Efnb3O35393 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Efnb3O35393 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Efnb3O35393 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Efnb3O35393 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC10.66□□□□□ -0.7
Efnb3O35393 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Efnb3O35393 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Efnb3O35393 AC139350.1-201ENSMUST00000227064 1594 ntBASIC10.66□□□□□ -0.7
Efnb3O35393 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Efnb3O35393 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
Efnb3O35393 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Efnb3O35393 Mir698-201ENSMUST00000102164 109 ntBASIC10.66□□□□□ -0.7
Efnb3O35393 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Efnb3O35393 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC10.66□□□□□ -0.7
Efnb3O35393 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Efnb3O35393 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC10.66□□□□□ -0.7
Efnb3O35393 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Efnb3O35393 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC10.66□□□□□ -0.7
Efnb3O35393 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
Efnb3O35393 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC10.66□□□□□ -0.7
Efnb3O35393 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC10.66□□□□□ -0.7
Efnb3O35393 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC10.66□□□□□ -0.7
Efnb3O35393 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC10.66□□□□□ -0.7
Efnb3O35393 Gm38225-201ENSMUST00000194001 393 ntBASIC10.66□□□□□ -0.7
Efnb3O35393 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Efnb3O35393 AC149588.3-201ENSMUST00000227515 150 ntBASIC10.66□□□□□ -0.7
Efnb3O35393 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Efnb3O35393 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Efnb3O35393 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Efnb3O35393 Mir125a-201ENSMUST00000083545 68 ntBASIC10.66□□□□□ -0.7
Efnb3O35393 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Efnb3O35393 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Efnb3O35393 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Efnb3O35393 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Efnb3O35393 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Efnb3O35393 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Efnb3O35393 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Efnb3O35393 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC10.66□□□□□ -0.7
Efnb3O35393 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Efnb3O35393 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Efnb3O35393 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Efnb3O35393 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC10.66□□□□□ -0.7
Efnb3O35393 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Efnb3O35393 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Efnb3O35393 AC116503.1-201ENSMUST00000215445 2192 ntBASIC10.66□□□□□ -0.7
Efnb3O35393 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC10.66□□□□□ -0.7
Efnb3O35393 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Efnb3O35393 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Efnb3O35393 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC10.66□□□□□ -0.7
Efnb3O35393 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Efnb3O35393 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Efnb3O35393 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Efnb3O35393 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Efnb3O35393 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC10.65□□□□□ -0.7
Efnb3O35393 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Efnb3O35393 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Efnb3O35393 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Efnb3O35393 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Efnb3O35393 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Efnb3O35393 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Efnb3O35393 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Efnb3O35393 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Efnb3O35393 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Efnb3O35393 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Efnb3O35393 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Efnb3O35393 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms