Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Polr1aO35134 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Polr1aO35134 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Polr1aO35134 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Polr1aO35134 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Polr1aO35134 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Polr1aO35134 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Polr1aO35134 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Polr1aO35134 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Polr1aO35134 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Polr1aO35134 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Polr1aO35134 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Polr1aO35134 Gm9333-201ENSMUST00000205452 1323 ntBASIC20.33■□□□□ 0.85
Polr1aO35134 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Polr1aO35134 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Polr1aO35134 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC20.33■□□□□ 0.85
Polr1aO35134 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC20.33■□□□□ 0.85
Polr1aO35134 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC20.33■□□□□ 0.85
Polr1aO35134 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC20.33■□□□□ 0.85
Polr1aO35134 Gm8712-201ENSMUST00000221090 701 ntBASIC20.33■□□□□ 0.85
Polr1aO35134 AC123665.1-201ENSMUST00000228204 438 ntBASIC20.33■□□□□ 0.85
Polr1aO35134 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC20.33■□□□□ 0.85
Polr1aO35134 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Polr1aO35134 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Polr1aO35134 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Polr1aO35134 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Polr1aO35134 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Polr1aO35134 AC159649.2-201ENSMUST00000222984 3223 ntBASIC20.33■□□□□ 0.84
Polr1aO35134 Gm23200-201ENSMUST00000104379 132 ntBASIC20.33■□□□□ 0.84
Polr1aO35134 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Polr1aO35134 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Polr1aO35134 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Polr1aO35134 AC167013.1-201ENSMUST00000228592 202 ntBASIC20.33■□□□□ 0.84
Polr1aO35134 Gm8385-201ENSMUST00000058999 643 ntBASIC20.33■□□□□ 0.84
Polr1aO35134 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Polr1aO35134 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC20.33■□□□□ 0.84
Polr1aO35134 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Polr1aO35134 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Polr1aO35134 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Polr1aO35134 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC20.32■□□□□ 0.84
Polr1aO35134 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Polr1aO35134 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Polr1aO35134 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Polr1aO35134 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Polr1aO35134 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC20.32■□□□□ 0.84
Polr1aO35134 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC20.32■□□□□ 0.84
Polr1aO35134 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Polr1aO35134 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Polr1aO35134 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
Polr1aO35134 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Polr1aO35134 Ighv5-7-201ENSMUST00000192302 244 ntBASIC20.32■□□□□ 0.84
Polr1aO35134 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Polr1aO35134 Gm45224-201ENSMUST00000208203 414 ntBASIC20.32■□□□□ 0.84
Polr1aO35134 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC20.32■□□□□ 0.84
Polr1aO35134 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC20.32■□□□□ 0.84
Polr1aO35134 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Polr1aO35134 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Polr1aO35134 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Polr1aO35134 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Polr1aO35134 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Polr1aO35134 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Polr1aO35134 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Polr1aO35134 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Polr1aO35134 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Polr1aO35134 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
Polr1aO35134 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Polr1aO35134 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Polr1aO35134 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Polr1aO35134 B9d1os-201ENSMUST00000137010 674 ntBASIC20.31■□□□□ 0.84
Polr1aO35134 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC20.31■□□□□ 0.84
Polr1aO35134 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC20.31■□□□□ 0.84
Polr1aO35134 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC20.31■□□□□ 0.84
Polr1aO35134 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Polr1aO35134 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Polr1aO35134 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Polr1aO35134 Gm6992-201ENSMUST00000217973 1607 ntBASIC20.31■□□□□ 0.84
Polr1aO35134 Gm4782-201ENSMUST00000168705 2046 ntBASIC20.31■□□□□ 0.84
Polr1aO35134 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Polr1aO35134 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Polr1aO35134 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Polr1aO35134 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Polr1aO35134 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Polr1aO35134 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Polr1aO35134 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Polr1aO35134 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Polr1aO35134 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Polr1aO35134 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Polr1aO35134 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Polr1aO35134 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Polr1aO35134 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Polr1aO35134 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
Polr1aO35134 Gm12058-201ENSMUST00000118614 437 ntBASIC20.3■□□□□ 0.84
Polr1aO35134 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Polr1aO35134 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC20.3■□□□□ 0.84
Polr1aO35134 Gm37986-201ENSMUST00000193285 383 ntBASIC20.3■□□□□ 0.84
Polr1aO35134 Gm45691-201ENSMUST00000206905 1120 ntBASIC20.3■□□□□ 0.84
Polr1aO35134 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Polr1aO35134 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC20.3■□□□□ 0.84
Polr1aO35134 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Polr1aO35134 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms