Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Shisa8J3QNX5 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shisa8J3QNX5 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Shisa8J3QNX5 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shisa8J3QNX5 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.29□□□□□ -0.44
Shisa8J3QNX5 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Shisa8J3QNX5 Gm1401-201ENSMUST00000122048 772 ntBASIC12.29□□□□□ -0.44
Shisa8J3QNX5 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Shisa8J3QNX5 Gm44719-201ENSMUST00000206404 149 ntBASIC12.29□□□□□ -0.44
Shisa8J3QNX5 Mzt1-203ENSMUST00000227948 952 ntBASIC12.29□□□□□ -0.44
Shisa8J3QNX5 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shisa8J3QNX5 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shisa8J3QNX5 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Shisa8J3QNX5 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shisa8J3QNX5 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.29□□□□□ -0.44
Shisa8J3QNX5 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Shisa8J3QNX5 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Shisa8J3QNX5 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.29□□□□□ -0.44
Shisa8J3QNX5 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shisa8J3QNX5 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shisa8J3QNX5 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shisa8J3QNX5 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.29□□□□□ -0.44
Shisa8J3QNX5 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shisa8J3QNX5 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Shisa8J3QNX5 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa8J3QNX5 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.28□□□□□ -0.44
Shisa8J3QNX5 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa8J3QNX5 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Shisa8J3QNX5 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa8J3QNX5 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa8J3QNX5 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.28□□□□□ -0.44
Shisa8J3QNX5 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa8J3QNX5 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.28□□□□□ -0.44
Shisa8J3QNX5 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa8J3QNX5 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa8J3QNX5 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa8J3QNX5 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.28□□□□□ -0.44
Shisa8J3QNX5 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa8J3QNX5 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa8J3QNX5 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa8J3QNX5 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12.28□□□□□ -0.44
Shisa8J3QNX5 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.28□□□□□ -0.44
Shisa8J3QNX5 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa8J3QNX5 Mir8117-201ENSMUST00000184773 107 ntBASIC12.28□□□□□ -0.44
Shisa8J3QNX5 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa8J3QNX5 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa8J3QNX5 Gm6916-202ENSMUST00000205523 195 ntBASIC12.28□□□□□ -0.44
Shisa8J3QNX5 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.28□□□□□ -0.44
Shisa8J3QNX5 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa8J3QNX5 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa8J3QNX5 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.28□□□□□ -0.44
Shisa8J3QNX5 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.28□□□□□ -0.44
Shisa8J3QNX5 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa8J3QNX5 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa8J3QNX5 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa8J3QNX5 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa8J3QNX5 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa8J3QNX5 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa8J3QNX5 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa8J3QNX5 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa8J3QNX5 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa8J3QNX5 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa8J3QNX5 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa8J3QNX5 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa8J3QNX5 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa8J3QNX5 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.28□□□□□ -0.44
Shisa8J3QNX5 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa8J3QNX5 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shisa8J3QNX5 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Shisa8J3QNX5 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Shisa8J3QNX5 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Shisa8J3QNX5 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Shisa8J3QNX5 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.27□□□□□ -0.44
Shisa8J3QNX5 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Shisa8J3QNX5 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Shisa8J3QNX5 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Shisa8J3QNX5 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.27□□□□□ -0.44
Shisa8J3QNX5 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.27□□□□□ -0.44
Shisa8J3QNX5 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Shisa8J3QNX5 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shisa8J3QNX5 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.27□□□□□ -0.45
Shisa8J3QNX5 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shisa8J3QNX5 Mir698-201ENSMUST00000102164 109 ntBASIC12.27□□□□□ -0.45
Shisa8J3QNX5 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.27□□□□□ -0.45
Shisa8J3QNX5 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Shisa8J3QNX5 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.27□□□□□ -0.45
Shisa8J3QNX5 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Shisa8J3QNX5 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.27□□□□□ -0.45
Shisa8J3QNX5 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Shisa8J3QNX5 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.27□□□□□ -0.45
Shisa8J3QNX5 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Shisa8J3QNX5 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.27□□□□□ -0.45
Shisa8J3QNX5 Gm45612-201ENSMUST00000211320 160 ntBASIC12.27□□□□□ -0.45
Shisa8J3QNX5 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shisa8J3QNX5 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shisa8J3QNX5 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shisa8J3QNX5 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Shisa8J3QNX5 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shisa8J3QNX5 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Shisa8J3QNX5 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms