Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcf11G3X9Z4 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcf11G3X9Z4 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pcf11G3X9Z4 Gm23363-201ENSMUST00000175024 79 ntBASIC20.06■□□□□ 0.8
Pcf11G3X9Z4 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcf11G3X9Z4 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Pcf11G3X9Z4 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcf11G3X9Z4 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcf11G3X9Z4 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcf11G3X9Z4 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcf11G3X9Z4 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pcf11G3X9Z4 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcf11G3X9Z4 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Pcf11G3X9Z4 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcf11G3X9Z4 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Pcf11G3X9Z4 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
Pcf11G3X9Z4 Gm11405-201ENSMUST00000118689 1556 ntBASIC20.05■□□□□ 0.8
Pcf11G3X9Z4 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC20.05■□□□□ 0.8
Pcf11G3X9Z4 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcf11G3X9Z4 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcf11G3X9Z4 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC20.05■□□□□ 0.8
Pcf11G3X9Z4 Gm5597-201ENSMUST00000182353 1193 ntBASIC20.05■□□□□ 0.8
Pcf11G3X9Z4 Gm2546-201ENSMUST00000182630 991 ntBASIC20.05■□□□□ 0.8
Pcf11G3X9Z4 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC20.05■□□□□ 0.8
Pcf11G3X9Z4 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC20.05■□□□□ 0.8
Pcf11G3X9Z4 Gm18615-201ENSMUST00000222919 1031 ntBASIC20.05■□□□□ 0.8
Pcf11G3X9Z4 AC166095.1-201ENSMUST00000223731 1241 ntBASIC20.05■□□□□ 0.8
Pcf11G3X9Z4 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcf11G3X9Z4 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC20.05■□□□□ 0.8
Pcf11G3X9Z4 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcf11G3X9Z4 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcf11G3X9Z4 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcf11G3X9Z4 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Pcf11G3X9Z4 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcf11G3X9Z4 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcf11G3X9Z4 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcf11G3X9Z4 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcf11G3X9Z4 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcf11G3X9Z4 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Pcf11G3X9Z4 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
Pcf11G3X9Z4 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC20.04■□□□□ 0.8
Pcf11G3X9Z4 Gm24830-201ENSMUST00000102024 166 ntBASIC20.04■□□□□ 0.8
Pcf11G3X9Z4 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcf11G3X9Z4 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC20.04■□□□□ 0.8
Pcf11G3X9Z4 Gm25890-201ENSMUST00000177643 165 ntBASIC20.04■□□□□ 0.8
Pcf11G3X9Z4 Rnu1b2-201ENSMUST00000178073 165 ntBASIC20.04■□□□□ 0.8
Pcf11G3X9Z4 Rnu1b1-201ENSMUST00000178250 165 ntBASIC20.04■□□□□ 0.8
Pcf11G3X9Z4 Gm22614-201ENSMUST00000178300 165 ntBASIC20.04■□□□□ 0.8
Pcf11G3X9Z4 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcf11G3X9Z4 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Pcf11G3X9Z4 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC20.04■□□□□ 0.8
Pcf11G3X9Z4 AA914427-201ENSMUST00000193194 1166 ntBASIC20.04■□□□□ 0.8
Pcf11G3X9Z4 Gm19931-201ENSMUST00000198920 368 ntBASIC20.04■□□□□ 0.8
Pcf11G3X9Z4 Gm45186-201ENSMUST00000206874 478 ntBASIC20.04■□□□□ 0.8
Pcf11G3X9Z4 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC20.04■□□□□ 0.8
Pcf11G3X9Z4 Gm22042-201ENSMUST00000082989 165 ntBASIC20.04■□□□□ 0.8
Pcf11G3X9Z4 Gm26232-201ENSMUST00000083360 166 ntBASIC20.04■□□□□ 0.8
Pcf11G3X9Z4 Gm24136-201ENSMUST00000083374 165 ntBASIC20.04■□□□□ 0.8
Pcf11G3X9Z4 Rnu1b6-201ENSMUST00000083839 166 ntBASIC20.04■□□□□ 0.8
Pcf11G3X9Z4 Gm26110-201ENSMUST00000083971 165 ntBASIC20.04■□□□□ 0.8
Pcf11G3X9Z4 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcf11G3X9Z4 Gm8862-201ENSMUST00000198379 1346 ntBASIC20.04■□□□□ 0.8
Pcf11G3X9Z4 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Pcf11G3X9Z4 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC20.04■□□□□ 0.8
Pcf11G3X9Z4 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcf11G3X9Z4 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC20.04■□□□□ 0.8
Pcf11G3X9Z4 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcf11G3X9Z4 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Pcf11G3X9Z4 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcf11G3X9Z4 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcf11G3X9Z4 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcf11G3X9Z4 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcf11G3X9Z4 Gm15459-201ENSMUST00000117405 1941 ntBASIC20.04■□□□□ 0.8
Pcf11G3X9Z4 Gm8355-201ENSMUST00000177767 1941 ntBASIC20.04■□□□□ 0.8
Pcf11G3X9Z4 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcf11G3X9Z4 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Pcf11G3X9Z4 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcf11G3X9Z4 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcf11G3X9Z4 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC20.04■□□□□ 0.8
Pcf11G3X9Z4 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC20.04■□□□□ 0.8
Pcf11G3X9Z4 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC20.04■□□□□ 0.8
Pcf11G3X9Z4 Gm7619-201ENSMUST00000210649 1282 ntBASIC20.04■□□□□ 0.8
Pcf11G3X9Z4 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcf11G3X9Z4 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcf11G3X9Z4 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcf11G3X9Z4 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcf11G3X9Z4 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcf11G3X9Z4 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Pcf11G3X9Z4 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcf11G3X9Z4 Daam2-202ENSMUST00000224595 1926 ntBASIC20.03■□□□□ 0.8
Pcf11G3X9Z4 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcf11G3X9Z4 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcf11G3X9Z4 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcf11G3X9Z4 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pcf11G3X9Z4 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcf11G3X9Z4 Gm8885-201ENSMUST00000189382 598 ntBASIC20.03■□□□□ 0.8
Pcf11G3X9Z4 Gm38317-201ENSMUST00000195564 343 ntBASIC20.03■□□□□ 0.8
Pcf11G3X9Z4 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcf11G3X9Z4 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcf11G3X9Z4 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms