Protein–RNA interactions for Protein: F8VQ70

Scaper, S phase cyclin A-associated protein in the ER, mousemouse

Known RBP Predictions only

Length 1,398 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ScaperF8VQ70 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ScaperF8VQ70 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ScaperF8VQ70 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ScaperF8VQ70 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ScaperF8VQ70 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ScaperF8VQ70 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ScaperF8VQ70 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ScaperF8VQ70 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ScaperF8VQ70 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ScaperF8VQ70 Mir7070-201ENSMUST00000183657 86 ntBASIC17.09■□□□□ 0.33
ScaperF8VQ70 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC17.09■□□□□ 0.33
ScaperF8VQ70 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC17.09■□□□□ 0.33
ScaperF8VQ70 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ScaperF8VQ70 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ScaperF8VQ70 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ScaperF8VQ70 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ScaperF8VQ70 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ScaperF8VQ70 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ScaperF8VQ70 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ScaperF8VQ70 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ScaperF8VQ70 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ScaperF8VQ70 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ScaperF8VQ70 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ScaperF8VQ70 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ScaperF8VQ70 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ScaperF8VQ70 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC17.08■□□□□ 0.33
ScaperF8VQ70 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
ScaperF8VQ70 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ScaperF8VQ70 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
ScaperF8VQ70 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
ScaperF8VQ70 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
ScaperF8VQ70 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ScaperF8VQ70 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ScaperF8VQ70 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC17.08■□□□□ 0.32
ScaperF8VQ70 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ScaperF8VQ70 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC17.08■□□□□ 0.32
ScaperF8VQ70 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
ScaperF8VQ70 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ScaperF8VQ70 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
ScaperF8VQ70 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ScaperF8VQ70 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ScaperF8VQ70 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ScaperF8VQ70 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
ScaperF8VQ70 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC17.08■□□□□ 0.32
ScaperF8VQ70 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
ScaperF8VQ70 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ScaperF8VQ70 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ScaperF8VQ70 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
ScaperF8VQ70 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ScaperF8VQ70 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ScaperF8VQ70 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ScaperF8VQ70 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ScaperF8VQ70 Gm10729-202ENSMUST00000193403 1375 ntBASIC17.08■□□□□ 0.32
ScaperF8VQ70 AC121805.2-201ENSMUST00000218808 2538 ntBASIC17.08■□□□□ 0.32
ScaperF8VQ70 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ScaperF8VQ70 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ScaperF8VQ70 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ScaperF8VQ70 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ScaperF8VQ70 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ScaperF8VQ70 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ScaperF8VQ70 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
ScaperF8VQ70 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
ScaperF8VQ70 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ScaperF8VQ70 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
ScaperF8VQ70 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ScaperF8VQ70 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC17.07■□□□□ 0.32
ScaperF8VQ70 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC17.07■□□□□ 0.32
ScaperF8VQ70 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC17.07■□□□□ 0.32
ScaperF8VQ70 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC17.07■□□□□ 0.32
ScaperF8VQ70 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ScaperF8VQ70 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ScaperF8VQ70 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ScaperF8VQ70 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ScaperF8VQ70 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ScaperF8VQ70 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ScaperF8VQ70 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ScaperF8VQ70 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC17.07■□□□□ 0.32
ScaperF8VQ70 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ScaperF8VQ70 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
ScaperF8VQ70 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ScaperF8VQ70 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
ScaperF8VQ70 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ScaperF8VQ70 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC17.06■□□□□ 0.32
ScaperF8VQ70 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ScaperF8VQ70 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
ScaperF8VQ70 Gm42550-201ENSMUST00000201553 960 ntBASIC17.06■□□□□ 0.32
ScaperF8VQ70 Gm6334-201ENSMUST00000207083 228 ntBASIC17.06■□□□□ 0.32
ScaperF8VQ70 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
ScaperF8VQ70 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ScaperF8VQ70 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC17.06■□□□□ 0.32
ScaperF8VQ70 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ScaperF8VQ70 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ScaperF8VQ70 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC17.06■□□□□ 0.32
ScaperF8VQ70 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ScaperF8VQ70 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ScaperF8VQ70 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC17.06■□□□□ 0.32
ScaperF8VQ70 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ScaperF8VQ70 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ScaperF8VQ70 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC17.06■□□□□ 0.32
ScaperF8VQ70 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms