Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Colca2F8VPY8 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Colca2F8VPY8 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Colca2F8VPY8 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Colca2F8VPY8 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.65□□□□□ -0.38
Colca2F8VPY8 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.65□□□□□ -0.38
Colca2F8VPY8 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Colca2F8VPY8 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.65□□□□□ -0.38
Colca2F8VPY8 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.65□□□□□ -0.38
Colca2F8VPY8 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Colca2F8VPY8 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.65□□□□□ -0.38
Colca2F8VPY8 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.65□□□□□ -0.38
Colca2F8VPY8 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.65□□□□□ -0.38
Colca2F8VPY8 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC12.65□□□□□ -0.38
Colca2F8VPY8 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Colca2F8VPY8 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.65□□□□□ -0.38
Colca2F8VPY8 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.65□□□□□ -0.38
Colca2F8VPY8 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Colca2F8VPY8 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Colca2F8VPY8 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Colca2F8VPY8 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Colca2F8VPY8 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Colca2F8VPY8 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Colca2F8VPY8 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Colca2F8VPY8 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Colca2F8VPY8 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Colca2F8VPY8 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Colca2F8VPY8 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Colca2F8VPY8 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Colca2F8VPY8 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Colca2F8VPY8 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.64□□□□□ -0.39
Colca2F8VPY8 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.64□□□□□ -0.39
Colca2F8VPY8 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Colca2F8VPY8 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Colca2F8VPY8 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Colca2F8VPY8 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.64□□□□□ -0.39
Colca2F8VPY8 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Colca2F8VPY8 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Colca2F8VPY8 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Colca2F8VPY8 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Colca2F8VPY8 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.64□□□□□ -0.39
Colca2F8VPY8 Gm11331-201ENSMUST00000119764 288 ntBASIC12.64□□□□□ -0.39
Colca2F8VPY8 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Colca2F8VPY8 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Colca2F8VPY8 Gm27023-201ENSMUST00000182372 285 ntBASIC12.64□□□□□ -0.39
Colca2F8VPY8 Gm28450-201ENSMUST00000187349 638 ntBASIC12.64□□□□□ -0.39
Colca2F8VPY8 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.64□□□□□ -0.39
Colca2F8VPY8 CT009718.3-201ENSMUST00000221116 367 ntBASIC12.64□□□□□ -0.39
Colca2F8VPY8 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Colca2F8VPY8 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Colca2F8VPY8 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Colca2F8VPY8 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Colca2F8VPY8 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Colca2F8VPY8 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Colca2F8VPY8 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.64□□□□□ -0.39
Colca2F8VPY8 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Colca2F8VPY8 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Colca2F8VPY8 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Colca2F8VPY8 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Colca2F8VPY8 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Colca2F8VPY8 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Colca2F8VPY8 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Colca2F8VPY8 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Colca2F8VPY8 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Colca2F8VPY8 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Colca2F8VPY8 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Colca2F8VPY8 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Colca2F8VPY8 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Colca2F8VPY8 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Colca2F8VPY8 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.63□□□□□ -0.39
Colca2F8VPY8 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Colca2F8VPY8 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Colca2F8VPY8 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Colca2F8VPY8 Gm13875-201ENSMUST00000120162 282 ntBASIC12.63□□□□□ -0.39
Colca2F8VPY8 Gm15782-201ENSMUST00000121073 445 ntBASIC12.63□□□□□ -0.39
Colca2F8VPY8 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.63□□□□□ -0.39
Colca2F8VPY8 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Colca2F8VPY8 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.63□□□□□ -0.39
Colca2F8VPY8 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.63□□□□□ -0.39
Colca2F8VPY8 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Colca2F8VPY8 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Colca2F8VPY8 Gm8546-201ENSMUST00000178288 1264 ntBASIC12.63□□□□□ -0.39
Colca2F8VPY8 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.63□□□□□ -0.39
Colca2F8VPY8 AC154680.1-201ENSMUST00000224376 859 ntBASIC12.63□□□□□ -0.39
Colca2F8VPY8 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Colca2F8VPY8 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Colca2F8VPY8 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Colca2F8VPY8 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Colca2F8VPY8 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Colca2F8VPY8 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Colca2F8VPY8 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Colca2F8VPY8 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Colca2F8VPY8 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.63□□□□□ -0.39
Colca2F8VPY8 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Colca2F8VPY8 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Colca2F8VPY8 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Colca2F8VPY8 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Colca2F8VPY8 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Colca2F8VPY8 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Colca2F8VPY8 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms