Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc188F6WEU2 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Ccdc188F6WEU2 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc188F6WEU2 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Ccdc188F6WEU2 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc188F6WEU2 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc188F6WEU2 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc188F6WEU2 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.49□□□□□ -0.25
Ccdc188F6WEU2 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc188F6WEU2 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc188F6WEU2 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.49□□□□□ -0.25
Ccdc188F6WEU2 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Ccdc188F6WEU2 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC13.49□□□□□ -0.25
Ccdc188F6WEU2 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc188F6WEU2 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc188F6WEU2 Rmrp-201ENSMUST00000157463 271 ntBASIC13.49□□□□□ -0.25
Ccdc188F6WEU2 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC13.49□□□□□ -0.25
Ccdc188F6WEU2 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC13.49□□□□□ -0.25
Ccdc188F6WEU2 Gm6771-201ENSMUST00000182716 1001 ntBASIC13.49□□□□□ -0.25
Ccdc188F6WEU2 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.49□□□□□ -0.25
Ccdc188F6WEU2 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc188F6WEU2 Gm45691-201ENSMUST00000206905 1120 ntBASIC13.49□□□□□ -0.25
Ccdc188F6WEU2 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC13.49□□□□□ -0.25
Ccdc188F6WEU2 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.49□□□□□ -0.25
Ccdc188F6WEU2 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC13.49□□□□□ -0.25
Ccdc188F6WEU2 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.49□□□□□ -0.25
Ccdc188F6WEU2 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc188F6WEU2 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.49□□□□□ -0.25
Ccdc188F6WEU2 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc188F6WEU2 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.49□□□□□ -0.25
Ccdc188F6WEU2 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc188F6WEU2 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc188F6WEU2 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Ccdc188F6WEU2 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc188F6WEU2 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc188F6WEU2 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc188F6WEU2 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc188F6WEU2 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc188F6WEU2 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc188F6WEU2 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc188F6WEU2 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.48□□□□□ -0.25
Ccdc188F6WEU2 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc188F6WEU2 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.48□□□□□ -0.25
Ccdc188F6WEU2 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc188F6WEU2 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc188F6WEU2 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc188F6WEU2 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc188F6WEU2 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc188F6WEU2 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc188F6WEU2 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Ccdc188F6WEU2 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC13.48□□□□□ -0.25
Ccdc188F6WEU2 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC13.48□□□□□ -0.25
Ccdc188F6WEU2 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc188F6WEU2 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc188F6WEU2 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc188F6WEU2 Gm9358-201ENSMUST00000183067 927 ntBASIC13.48□□□□□ -0.25
Ccdc188F6WEU2 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc188F6WEU2 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.48□□□□□ -0.25
Ccdc188F6WEU2 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC13.48□□□□□ -0.25
Ccdc188F6WEU2 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC13.48□□□□□ -0.25
Ccdc188F6WEU2 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.48□□□□□ -0.25
Ccdc188F6WEU2 AC154184.3-201ENSMUST00000225620 1090 ntBASIC13.48□□□□□ -0.25
Ccdc188F6WEU2 CT030637.1-201ENSMUST00000228016 669 ntBASIC13.48□□□□□ -0.25
Ccdc188F6WEU2 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Ccdc188F6WEU2 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc188F6WEU2 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Ccdc188F6WEU2 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Ccdc188F6WEU2 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.48□□□□□ -0.25
Ccdc188F6WEU2 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc188F6WEU2 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc188F6WEU2 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc188F6WEU2 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.48□□□□□ -0.25
Ccdc188F6WEU2 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc188F6WEU2 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc188F6WEU2 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc188F6WEU2 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc188F6WEU2 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc188F6WEU2 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.47□□□□□ -0.25
Ccdc188F6WEU2 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc188F6WEU2 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc188F6WEU2 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.47□□□□□ -0.25
Ccdc188F6WEU2 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc188F6WEU2 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc188F6WEU2 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc188F6WEU2 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc188F6WEU2 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc188F6WEU2 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc188F6WEU2 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc188F6WEU2 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc188F6WEU2 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc188F6WEU2 Rprl1-202ENSMUST00000198476 238 ntBASIC13.47□□□□□ -0.25
Ccdc188F6WEU2 Gm7902-201ENSMUST00000198842 947 ntBASIC13.47□□□□□ -0.25
Ccdc188F6WEU2 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.47□□□□□ -0.25
Ccdc188F6WEU2 Gm43610-201ENSMUST00000199117 365 ntBASIC13.47□□□□□ -0.25
Ccdc188F6WEU2 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC13.47□□□□□ -0.25
Ccdc188F6WEU2 Gm5904-201ENSMUST00000210286 865 ntBASIC13.47□□□□□ -0.25
Ccdc188F6WEU2 Gm3028-201ENSMUST00000213805 1119 ntBASIC13.47□□□□□ -0.25
Ccdc188F6WEU2 Gm19640-201ENSMUST00000214849 464 ntBASIC13.47□□□□□ -0.25
Ccdc188F6WEU2 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC13.47□□□□□ -0.25
Ccdc188F6WEU2 AC166095.1-201ENSMUST00000223731 1241 ntBASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms