Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC15.83■□□□□ 0.13
Pcdhb9E9Q5G2 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdhb9E9Q5G2 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb9E9Q5G2 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb9E9Q5G2 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb9E9Q5G2 Gm8213-201ENSMUST00000118191 441 ntBASIC15.83■□□□□ 0.12
Pcdhb9E9Q5G2 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb9E9Q5G2 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Pcdhb9E9Q5G2 Gm44064-201ENSMUST00000204964 1087 ntBASIC15.83■□□□□ 0.12
Pcdhb9E9Q5G2 Cdk7-205ENSMUST00000225990 1159 ntBASIC15.83■□□□□ 0.12
Pcdhb9E9Q5G2 CT573086.1-201ENSMUST00000227202 1074 ntBASIC15.83■□□□□ 0.12
Pcdhb9E9Q5G2 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb9E9Q5G2 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC15.83■□□□□ 0.12
Pcdhb9E9Q5G2 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb9E9Q5G2 Gm13050-201ENSMUST00000122149 1345 ntBASIC15.83■□□□□ 0.12
Pcdhb9E9Q5G2 AC114008.2-201ENSMUST00000227699 1347 ntBASIC15.83■□□□□ 0.12
Pcdhb9E9Q5G2 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC15.83■□□□□ 0.12
Pcdhb9E9Q5G2 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb9E9Q5G2 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb9E9Q5G2 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb9E9Q5G2 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb9E9Q5G2 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb9E9Q5G2 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb9E9Q5G2 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb9E9Q5G2 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb9E9Q5G2 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb9E9Q5G2 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb9E9Q5G2 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb9E9Q5G2 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC15.83■□□□□ 0.12
Pcdhb9E9Q5G2 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb9E9Q5G2 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb9E9Q5G2 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Pcdhb9E9Q5G2 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb9E9Q5G2 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Pcdhb9E9Q5G2 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb9E9Q5G2 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Pcdhb9E9Q5G2 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb9E9Q5G2 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb9E9Q5G2 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Pcdhb9E9Q5G2 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb9E9Q5G2 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
Pcdhb9E9Q5G2 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC15.82■□□□□ 0.12
Pcdhb9E9Q5G2 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Pcdhb9E9Q5G2 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb9E9Q5G2 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC15.82■□□□□ 0.12
Pcdhb9E9Q5G2 AC134335.2-201ENSMUST00000227660 440 ntBASIC15.82■□□□□ 0.12
Pcdhb9E9Q5G2 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb9E9Q5G2 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb9E9Q5G2 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb9E9Q5G2 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb9E9Q5G2 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb9E9Q5G2 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb9E9Q5G2 Zscan30-202ENSMUST00000224144 1458 ntBASIC15.82■□□□□ 0.12
Pcdhb9E9Q5G2 Gm15544-201ENSMUST00000118776 1531 ntBASIC15.82■□□□□ 0.12
Pcdhb9E9Q5G2 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC15.82■□□□□ 0.12
Pcdhb9E9Q5G2 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Pcdhb9E9Q5G2 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb9E9Q5G2 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb9E9Q5G2 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb9E9Q5G2 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb9E9Q5G2 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb9E9Q5G2 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb9E9Q5G2 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb9E9Q5G2 AC154262.2-201ENSMUST00000224310 2293 ntBASIC15.82■□□□□ 0.12
Pcdhb9E9Q5G2 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb9E9Q5G2 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Pcdhb9E9Q5G2 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb9E9Q5G2 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb9E9Q5G2 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb9E9Q5G2 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb9E9Q5G2 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb9E9Q5G2 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC15.81■□□□□ 0.12
Pcdhb9E9Q5G2 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Pcdhb9E9Q5G2 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15.81■□□□□ 0.12
Pcdhb9E9Q5G2 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC15.81■□□□□ 0.12
Pcdhb9E9Q5G2 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb9E9Q5G2 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC15.81■□□□□ 0.12
Pcdhb9E9Q5G2 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb9E9Q5G2 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC15.81■□□□□ 0.12
Pcdhb9E9Q5G2 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC15.81■□□□□ 0.12
Pcdhb9E9Q5G2 AC155237.1-201ENSMUST00000226196 1279 ntBASIC15.81■□□□□ 0.12
Pcdhb9E9Q5G2 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Pcdhb9E9Q5G2 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb9E9Q5G2 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb9E9Q5G2 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb9E9Q5G2 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb9E9Q5G2 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb9E9Q5G2 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb9E9Q5G2 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb9E9Q5G2 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Pcdhb9E9Q5G2 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Pcdhb9E9Q5G2 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb9E9Q5G2 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb9E9Q5G2 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb9E9Q5G2 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb9E9Q5G2 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Pcdhb9E9Q5G2 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb9E9Q5G2 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb9E9Q5G2 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb9E9Q5G2 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms