Protein–RNA interactions for Protein: E9PZM4

Chd2, Chromodomain-helicase-DNA-binding protein 2, mousemouse

Known RBP Predictions only

Length 1,827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd2E9PZM4 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chd2E9PZM4 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Chd2E9PZM4 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Chd2E9PZM4 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC18.02■□□□□ 0.48
Chd2E9PZM4 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC18.02■□□□□ 0.48
Chd2E9PZM4 AY036118-201ENSMUST00000200021 923 ntBASIC18.02■□□□□ 0.48
Chd2E9PZM4 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC18.02■□□□□ 0.48
Chd2E9PZM4 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC18.02■□□□□ 0.48
Chd2E9PZM4 Gm21027-201ENSMUST00000219300 1236 ntBASIC18.02■□□□□ 0.48
Chd2E9PZM4 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Chd2E9PZM4 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC18.02■□□□□ 0.48
Chd2E9PZM4 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Chd2E9PZM4 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chd2E9PZM4 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chd2E9PZM4 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chd2E9PZM4 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chd2E9PZM4 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chd2E9PZM4 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chd2E9PZM4 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chd2E9PZM4 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Chd2E9PZM4 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Chd2E9PZM4 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC18.02■□□□□ 0.47
Chd2E9PZM4 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC18.02■□□□□ 0.47
Chd2E9PZM4 Gm12165-201ENSMUST00000117047 342 ntBASIC18.02■□□□□ 0.47
Chd2E9PZM4 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC18.02■□□□□ 0.47
Chd2E9PZM4 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Chd2E9PZM4 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.47
Chd2E9PZM4 Aprt-ps-201ENSMUST00000212311 505 ntBASIC18.02■□□□□ 0.47
Chd2E9PZM4 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Chd2E9PZM4 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Chd2E9PZM4 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Chd2E9PZM4 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Chd2E9PZM4 Gm43598-201ENSMUST00000202482 2479 ntBASIC18.02■□□□□ 0.47
Chd2E9PZM4 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC18.02■□□□□ 0.47
Chd2E9PZM4 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Chd2E9PZM4 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd2E9PZM4 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Chd2E9PZM4 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd2E9PZM4 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Chd2E9PZM4 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Chd2E9PZM4 Gm13035-201ENSMUST00000117496 342 ntBASIC18.01■□□□□ 0.47
Chd2E9PZM4 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Chd2E9PZM4 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Chd2E9PZM4 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC18.01■□□□□ 0.47
Chd2E9PZM4 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC18.01■□□□□ 0.47
Chd2E9PZM4 Gm29615-201ENSMUST00000185371 697 ntBASIC18.01■□□□□ 0.47
Chd2E9PZM4 Gm28224-201ENSMUST00000186078 697 ntBASIC18.01■□□□□ 0.47
Chd2E9PZM4 Gm29001-201ENSMUST00000186177 697 ntBASIC18.01■□□□□ 0.47
Chd2E9PZM4 Gm28292-201ENSMUST00000186593 697 ntBASIC18.01■□□□□ 0.47
Chd2E9PZM4 Gm28101-201ENSMUST00000187608 697 ntBASIC18.01■□□□□ 0.47
Chd2E9PZM4 Gm29076-201ENSMUST00000187689 697 ntBASIC18.01■□□□□ 0.47
Chd2E9PZM4 Gm28302-201ENSMUST00000187931 697 ntBASIC18.01■□□□□ 0.47
Chd2E9PZM4 Gm28646-201ENSMUST00000188220 697 ntBASIC18.01■□□□□ 0.47
Chd2E9PZM4 Gm28205-201ENSMUST00000189177 697 ntBASIC18.01■□□□□ 0.47
Chd2E9PZM4 Gm29032-201ENSMUST00000189797 697 ntBASIC18.01■□□□□ 0.47
Chd2E9PZM4 Gm28695-201ENSMUST00000190300 697 ntBASIC18.01■□□□□ 0.47
Chd2E9PZM4 Gm37448-201ENSMUST00000192795 697 ntBASIC18.01■□□□□ 0.47
Chd2E9PZM4 Gm37905-201ENSMUST00000195310 341 ntBASIC18.01■□□□□ 0.47
Chd2E9PZM4 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC18.01■□□□□ 0.47
Chd2E9PZM4 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Chd2E9PZM4 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd2E9PZM4 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd2E9PZM4 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Chd2E9PZM4 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd2E9PZM4 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd2E9PZM4 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd2E9PZM4 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Chd2E9PZM4 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd2E9PZM4 Gm15432-201ENSMUST00000121106 195 ntBASIC18■□□□□ 0.47
Chd2E9PZM4 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC18■□□□□ 0.47
Chd2E9PZM4 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC18■□□□□ 0.47
Chd2E9PZM4 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC18■□□□□ 0.47
Chd2E9PZM4 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC18■□□□□ 0.47
Chd2E9PZM4 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Chd2E9PZM4 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chd2E9PZM4 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC18■□□□□ 0.47
Chd2E9PZM4 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC18■□□□□ 0.47
Chd2E9PZM4 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Chd2E9PZM4 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC18■□□□□ 0.47
Chd2E9PZM4 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chd2E9PZM4 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Chd2E9PZM4 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Chd2E9PZM4 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chd2E9PZM4 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC18■□□□□ 0.47
Chd2E9PZM4 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chd2E9PZM4 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Chd2E9PZM4 Gm12314-201ENSMUST00000118104 538 ntBASIC18■□□□□ 0.47
Chd2E9PZM4 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC18■□□□□ 0.47
Chd2E9PZM4 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC18■□□□□ 0.47
Chd2E9PZM4 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
Chd2E9PZM4 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC18■□□□□ 0.47
Chd2E9PZM4 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC18■□□□□ 0.47
Chd2E9PZM4 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chd2E9PZM4 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC18■□□□□ 0.47
Chd2E9PZM4 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chd2E9PZM4 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chd2E9PZM4 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chd2E9PZM4 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chd2E9PZM4 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Chd2E9PZM4 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms