Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm35713-201ENSMUST00000210516 199 ntBASIC13.11□□□□□ -0.31
Col6a3E9PWQ3 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a3E9PWQ3 AC153962.2-201ENSMUST00000219417 550 ntBASIC13.11□□□□□ -0.31
Col6a3E9PWQ3 Lgi3-203ENSMUST00000226548 1001 ntBASIC13.11□□□□□ -0.31
Col6a3E9PWQ3 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC13.11□□□□□ -0.31
Col6a3E9PWQ3 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Col6a3E9PWQ3 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.11□□□□□ -0.31
Col6a3E9PWQ3 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a3E9PWQ3 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Col6a3E9PWQ3 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Col6a3E9PWQ3 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a3E9PWQ3 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a3E9PWQ3 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a3E9PWQ3 Gm26368-201ENSMUST00000157826 118 ntBASIC13.1□□□□□ -0.31
Col6a3E9PWQ3 Gm5616-201ENSMUST00000165252 384 ntBASIC13.1□□□□□ -0.31
Col6a3E9PWQ3 Gm8741-201ENSMUST00000174736 384 ntBASIC13.1□□□□□ -0.31
Col6a3E9PWQ3 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a3E9PWQ3 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a3E9PWQ3 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a3E9PWQ3 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a3E9PWQ3 Gm37859-201ENSMUST00000195529 2173 ntBASIC13.1□□□□□ -0.31
Col6a3E9PWQ3 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a3E9PWQ3 Gm15003-201ENSMUST00000118884 446 ntBASIC13.1□□□□□ -0.31
Col6a3E9PWQ3 Gm5257-201ENSMUST00000121823 790 ntBASIC13.1□□□□□ -0.31
Col6a3E9PWQ3 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a3E9PWQ3 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a3E9PWQ3 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a3E9PWQ3 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a3E9PWQ3 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a3E9PWQ3 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a3E9PWQ3 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a3E9PWQ3 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a3E9PWQ3 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.1□□□□□ -0.31
Col6a3E9PWQ3 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.1□□□□□ -0.31
Col6a3E9PWQ3 Gm7851-201ENSMUST00000117574 323 ntBASIC13.1□□□□□ -0.31
Col6a3E9PWQ3 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC13.1□□□□□ -0.31
Col6a3E9PWQ3 Gm4775-201ENSMUST00000169588 402 ntBASIC13.1□□□□□ -0.31
Col6a3E9PWQ3 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a3E9PWQ3 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Col6a3E9PWQ3 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a3E9PWQ3 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a3E9PWQ3 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.09□□□□□ -0.31
Col6a3E9PWQ3 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a3E9PWQ3 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a3E9PWQ3 Gm13700-201ENSMUST00000118624 1128 ntBASIC13.09□□□□□ -0.31
Col6a3E9PWQ3 Gm7722-201ENSMUST00000120646 741 ntBASIC13.09□□□□□ -0.31
Col6a3E9PWQ3 Gm11246-201ENSMUST00000120880 345 ntBASIC13.09□□□□□ -0.31
Col6a3E9PWQ3 Gm24845-201ENSMUST00000158034 109 ntBASIC13.09□□□□□ -0.31
Col6a3E9PWQ3 Gm28071-201ENSMUST00000190355 478 ntBASIC13.09□□□□□ -0.31
Col6a3E9PWQ3 Gm9916-201ENSMUST00000192943 1228 ntBASIC13.09□□□□□ -0.31
Col6a3E9PWQ3 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a3E9PWQ3 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a3E9PWQ3 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a3E9PWQ3 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a3E9PWQ3 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a3E9PWQ3 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.09□□□□□ -0.31
Col6a3E9PWQ3 Gm13216-201ENSMUST00000117145 591 ntBASIC13.09□□□□□ -0.31
Col6a3E9PWQ3 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Col6a3E9PWQ3 Gm42433-201ENSMUST00000196806 940 ntBASIC13.09□□□□□ -0.31
Col6a3E9PWQ3 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a3E9PWQ3 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a3E9PWQ3 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a3E9PWQ3 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a3E9PWQ3 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a3E9PWQ3 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a3E9PWQ3 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Col6a3E9PWQ3 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Col6a3E9PWQ3 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Col6a3E9PWQ3 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Col6a3E9PWQ3 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.08□□□□□ -0.31
Col6a3E9PWQ3 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC13.08□□□□□ -0.31
Col6a3E9PWQ3 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Col6a3E9PWQ3 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Col6a3E9PWQ3 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Col6a3E9PWQ3 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Col6a3E9PWQ3 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Col6a3E9PWQ3 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.08□□□□□ -0.32
Col6a3E9PWQ3 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a3E9PWQ3 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a3E9PWQ3 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a3E9PWQ3 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a3E9PWQ3 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a3E9PWQ3 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a3E9PWQ3 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a3E9PWQ3 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a3E9PWQ3 Gm8756-201ENSMUST00000183250 929 ntBASIC13.08□□□□□ -0.32
Col6a3E9PWQ3 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a3E9PWQ3 AC166344.1-202ENSMUST00000224139 234 ntBASIC13.08□□□□□ -0.32
Col6a3E9PWQ3 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a3E9PWQ3 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Col6a3E9PWQ3 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a3E9PWQ3 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a3E9PWQ3 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a3E9PWQ3 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a3E9PWQ3 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.08□□□□□ -0.32
Col6a3E9PWQ3 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a3E9PWQ3 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC13.08□□□□□ -0.32
Col6a3E9PWQ3 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a3E9PWQ3 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.08□□□□□ -0.32
Col6a3E9PWQ3 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms