Protein–RNA interactions for Protein: E9PW43

Gm10320, Protein transport protein Sec61 subunit beta, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10320E9PW43 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Gm10320E9PW43 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Gm10320E9PW43 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC8.56□□□□□ -1.04
Gm10320E9PW43 Gm14822-201ENSMUST00000122247 291 ntBASIC8.56□□□□□ -1.04
Gm10320E9PW43 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Gm10320E9PW43 Gm11025-201ENSMUST00000140773 466 ntBASIC8.56□□□□□ -1.04
Gm10320E9PW43 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Gm10320E9PW43 Gm26308-201ENSMUST00000157768 69 ntBASIC8.56□□□□□ -1.04
Gm10320E9PW43 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Gm10320E9PW43 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC8.56□□□□□ -1.04
Gm10320E9PW43 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Gm10320E9PW43 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Gm10320E9PW43 Gm18027-201ENSMUST00000218947 619 ntBASIC8.56□□□□□ -1.04
Gm10320E9PW43 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Gm10320E9PW43 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Gm10320E9PW43 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Gm10320E9PW43 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Gm10320E9PW43 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Gm10320E9PW43 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Gm10320E9PW43 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Gm10320E9PW43 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Gm10320E9PW43 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
Gm10320E9PW43 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Gm10320E9PW43 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Gm10320E9PW43 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Gm10320E9PW43 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Gm10320E9PW43 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Gm10320E9PW43 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC8.56□□□□□ -1.04
Gm10320E9PW43 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Gm10320E9PW43 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC8.56□□□□□ -1.04
Gm10320E9PW43 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
Gm10320E9PW43 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Gm10320E9PW43 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Gm10320E9PW43 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Gm10320E9PW43 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Gm10320E9PW43 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Gm10320E9PW43 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Gm10320E9PW43 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Gm10320E9PW43 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Gm10320E9PW43 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Gm10320E9PW43 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
Gm10320E9PW43 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Gm10320E9PW43 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC8.55□□□□□ -1.04
Gm10320E9PW43 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Gm10320E9PW43 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Gm10320E9PW43 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Gm10320E9PW43 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC8.55□□□□□ -1.04
Gm10320E9PW43 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Gm10320E9PW43 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Gm10320E9PW43 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC8.55□□□□□ -1.04
Gm10320E9PW43 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Gm10320E9PW43 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Gm10320E9PW43 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Gm10320E9PW43 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Gm10320E9PW43 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC8.55□□□□□ -1.04
Gm10320E9PW43 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Gm10320E9PW43 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Gm10320E9PW43 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Gm10320E9PW43 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Gm10320E9PW43 Gm43273-201ENSMUST00000199649 2594 ntBASIC8.55□□□□□ -1.04
Gm10320E9PW43 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Gm10320E9PW43 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Gm10320E9PW43 Gm15678-201ENSMUST00000117573 960 ntBASIC8.55□□□□□ -1.04
Gm10320E9PW43 Gm13823-201ENSMUST00000119930 345 ntBASIC8.55□□□□□ -1.04
Gm10320E9PW43 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC8.55□□□□□ -1.04
Gm10320E9PW43 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC8.55□□□□□ -1.04
Gm10320E9PW43 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Gm10320E9PW43 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC8.55□□□□□ -1.04
Gm10320E9PW43 Ighv8-7-201ENSMUST00000194349 297 ntBASIC8.55□□□□□ -1.04
Gm10320E9PW43 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC8.55□□□□□ -1.04
Gm10320E9PW43 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC8.55□□□□□ -1.04
Gm10320E9PW43 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Gm10320E9PW43 AC149294.4-201ENSMUST00000227870 882 ntBASIC8.55□□□□□ -1.04
Gm10320E9PW43 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Gm10320E9PW43 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Gm10320E9PW43 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Gm10320E9PW43 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Gm10320E9PW43 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Gm10320E9PW43 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Gm10320E9PW43 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Gm10320E9PW43 AC131586.3-201ENSMUST00000228355 1367 ntBASIC8.55□□□□□ -1.04
Gm10320E9PW43 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Gm10320E9PW43 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Gm10320E9PW43 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Gm10320E9PW43 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Gm10320E9PW43 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Gm10320E9PW43 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Gm10320E9PW43 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Gm10320E9PW43 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Gm10320E9PW43 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Gm10320E9PW43 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Gm10320E9PW43 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Gm10320E9PW43 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Gm10320E9PW43 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Gm10320E9PW43 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Gm10320E9PW43 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Gm10320E9PW43 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC8.55□□□□□ -1.04
Gm10320E9PW43 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Gm10320E9PW43 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Gm10320E9PW43 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms