Protein–RNA interactions for Protein: D3YXG0

Hmcn1, Hemicentin-1, mousemouse

Predictions only

Length 5,634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmcn1D3YXG0 Gm45117-201ENSMUST00000207250 1774 ntBASIC3.8□□□□□ -1.8
Hmcn1D3YXG0 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Hmcn1D3YXG0 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Hmcn1D3YXG0 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Hmcn1D3YXG0 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Hmcn1D3YXG0 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Hmcn1D3YXG0 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Hmcn1D3YXG0 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Hmcn1D3YXG0 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC3.8□□□□□ -1.8
Hmcn1D3YXG0 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
Hmcn1D3YXG0 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC3.8□□□□□ -1.8
Hmcn1D3YXG0 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Hmcn1D3YXG0 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Hmcn1D3YXG0 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Hmcn1D3YXG0 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Hmcn1D3YXG0 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Hmcn1D3YXG0 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Hmcn1D3YXG0 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC3.8□□□□□ -1.8
Hmcn1D3YXG0 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Hmcn1D3YXG0 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Hmcn1D3YXG0 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Hmcn1D3YXG0 Gm13736-201ENSMUST00000119272 253 ntBASIC3.8□□□□□ -1.8
Hmcn1D3YXG0 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Hmcn1D3YXG0 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Hmcn1D3YXG0 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Hmcn1D3YXG0 Gm9109-201ENSMUST00000120254 1405 ntBASIC3.8□□□□□ -1.8
Hmcn1D3YXG0 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Hmcn1D3YXG0 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
Hmcn1D3YXG0 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
Hmcn1D3YXG0 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Hmcn1D3YXG0 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Hmcn1D3YXG0 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC3.8□□□□□ -1.8
Hmcn1D3YXG0 Gm43014-201ENSMUST00000198568 2443 ntBASIC3.8□□□□□ -1.8
Hmcn1D3YXG0 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Hmcn1D3YXG0 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
Hmcn1D3YXG0 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC3.8□□□□□ -1.8
Hmcn1D3YXG0 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Hmcn1D3YXG0 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Hmcn1D3YXG0 Gm37420-201ENSMUST00000195332 2912 ntBASIC3.8□□□□□ -1.8
Hmcn1D3YXG0 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 CT009713.10-201ENSMUST00000225013 1986 ntBASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 Gm13809-201ENSMUST00000117921 597 ntBASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 Gm19009-201ENSMUST00000223072 823 ntBASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 Gm43061-201ENSMUST00000198850 2241 ntBASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 Gm43877-201ENSMUST00000205029 2238 ntBASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 Ntf3-203ENSMUST00000204542 1343 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 Gm38124-201ENSMUST00000191710 2581 ntBASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 Gm13700-201ENSMUST00000118624 1128 ntBASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 Gng5-ps-201ENSMUST00000120931 205 ntBASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 Gm5257-201ENSMUST00000121823 790 ntBASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 Gm24248-201ENSMUST00000157321 322 ntBASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 Gm23363-201ENSMUST00000175024 79 ntBASIC3.79□□□□□ -1.8
Hmcn1D3YXG0 Gm3809-201ENSMUST00000180973 1006 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms