Protein–RNA interactions for Protein: B4XVP9

Phf11c, PHD finger protein 11C, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf11cB4XVP9 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Phf11cB4XVP9 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Phf11cB4XVP9 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Phf11cB4XVP9 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Phf11cB4XVP9 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Phf11cB4XVP9 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Phf11cB4XVP9 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Phf11cB4XVP9 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Phf11cB4XVP9 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Phf11cB4XVP9 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Phf11cB4XVP9 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Phf11cB4XVP9 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Phf11cB4XVP9 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Phf11cB4XVP9 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Phf11cB4XVP9 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Phf11cB4XVP9 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Phf11cB4XVP9 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.78□□□□□ -0.36
Phf11cB4XVP9 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.78□□□□□ -0.36
Phf11cB4XVP9 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Phf11cB4XVP9 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Phf11cB4XVP9 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Phf11cB4XVP9 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Phf11cB4XVP9 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Phf11cB4XVP9 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Phf11cB4XVP9 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Phf11cB4XVP9 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Phf11cB4XVP9 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Phf11cB4XVP9 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Phf11cB4XVP9 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Phf11cB4XVP9 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Phf11cB4XVP9 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Phf11cB4XVP9 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Phf11cB4XVP9 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Phf11cB4XVP9 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Phf11cB4XVP9 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Phf11cB4XVP9 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Phf11cB4XVP9 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Phf11cB4XVP9 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Phf11cB4XVP9 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Phf11cB4XVP9 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.78□□□□□ -0.36
Phf11cB4XVP9 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.78□□□□□ -0.36
Phf11cB4XVP9 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Phf11cB4XVP9 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Phf11cB4XVP9 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Phf11cB4XVP9 Gm24513-201ENSMUST00000174964 138 ntBASIC12.78□□□□□ -0.36
Phf11cB4XVP9 Gm27397-201ENSMUST00000184997 107 ntBASIC12.78□□□□□ -0.36
Phf11cB4XVP9 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.78□□□□□ -0.36
Phf11cB4XVP9 Gm10253-201ENSMUST00000194270 940 ntBASIC12.78□□□□□ -0.36
Phf11cB4XVP9 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Phf11cB4XVP9 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Phf11cB4XVP9 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Phf11cB4XVP9 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Phf11cB4XVP9 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Phf11cB4XVP9 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Phf11cB4XVP9 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Phf11cB4XVP9 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Phf11cB4XVP9 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Phf11cB4XVP9 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Phf11cB4XVP9 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.78□□□□□ -0.36
Phf11cB4XVP9 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Phf11cB4XVP9 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Phf11cB4XVP9 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Phf11cB4XVP9 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Phf11cB4XVP9 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Phf11cB4XVP9 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Phf11cB4XVP9 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.77□□□□□ -0.36
Phf11cB4XVP9 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Phf11cB4XVP9 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Phf11cB4XVP9 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.77□□□□□ -0.36
Phf11cB4XVP9 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Phf11cB4XVP9 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.77□□□□□ -0.37
Phf11cB4XVP9 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.77□□□□□ -0.37
Phf11cB4XVP9 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.77□□□□□ -0.37
Phf11cB4XVP9 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Phf11cB4XVP9 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Phf11cB4XVP9 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Phf11cB4XVP9 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Phf11cB4XVP9 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.77□□□□□ -0.37
Phf11cB4XVP9 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Phf11cB4XVP9 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.77□□□□□ -0.37
Phf11cB4XVP9 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.77□□□□□ -0.37
Phf11cB4XVP9 Gm38294-201ENSMUST00000192831 381 ntBASIC12.77□□□□□ -0.37
Phf11cB4XVP9 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Phf11cB4XVP9 Gm44719-201ENSMUST00000206404 149 ntBASIC12.77□□□□□ -0.37
Phf11cB4XVP9 Gm46209-201ENSMUST00000217912 553 ntBASIC12.77□□□□□ -0.37
Phf11cB4XVP9 Chchd1-203ENSMUST00000224633 557 ntBASIC12.77□□□□□ -0.37
Phf11cB4XVP9 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.77□□□□□ -0.37
Phf11cB4XVP9 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.77□□□□□ -0.37
Phf11cB4XVP9 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Phf11cB4XVP9 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Phf11cB4XVP9 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Phf11cB4XVP9 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.77□□□□□ -0.37
Phf11cB4XVP9 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Phf11cB4XVP9 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.77□□□□□ -0.37
Phf11cB4XVP9 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Phf11cB4XVP9 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Phf11cB4XVP9 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.77□□□□□ -0.37
Phf11cB4XVP9 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Phf11cB4XVP9 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Phf11cB4XVP9 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms