Protein–RNA interactions for Protein: B2RXZ1

Pnldc1, Poly(A)-specific ribonuclease PNLDC1, mousemouse

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pnldc1B2RXZ1 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.57□□□□□ -0.24
Pnldc1B2RXZ1 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pnldc1B2RXZ1 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pnldc1B2RXZ1 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pnldc1B2RXZ1 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pnldc1B2RXZ1 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pnldc1B2RXZ1 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pnldc1B2RXZ1 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pnldc1B2RXZ1 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pnldc1B2RXZ1 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pnldc1B2RXZ1 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pnldc1B2RXZ1 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pnldc1B2RXZ1 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pnldc1B2RXZ1 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pnldc1B2RXZ1 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pnldc1B2RXZ1 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
Pnldc1B2RXZ1 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pnldc1B2RXZ1 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pnldc1B2RXZ1 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pnldc1B2RXZ1 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pnldc1B2RXZ1 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pnldc1B2RXZ1 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pnldc1B2RXZ1 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pnldc1B2RXZ1 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pnldc1B2RXZ1 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pnldc1B2RXZ1 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pnldc1B2RXZ1 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pnldc1B2RXZ1 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pnldc1B2RXZ1 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.56□□□□□ -0.24
Pnldc1B2RXZ1 Gm15240-201ENSMUST00000118156 720 ntBASIC13.56□□□□□ -0.24
Pnldc1B2RXZ1 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pnldc1B2RXZ1 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.56□□□□□ -0.24
Pnldc1B2RXZ1 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.56□□□□□ -0.24
Pnldc1B2RXZ1 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pnldc1B2RXZ1 Gm28760-201ENSMUST00000185995 736 ntBASIC13.56□□□□□ -0.24
Pnldc1B2RXZ1 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.56□□□□□ -0.24
Pnldc1B2RXZ1 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.56□□□□□ -0.24
Pnldc1B2RXZ1 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.56□□□□□ -0.24
Pnldc1B2RXZ1 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.56□□□□□ -0.24
Pnldc1B2RXZ1 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pnldc1B2RXZ1 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pnldc1B2RXZ1 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pnldc1B2RXZ1 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Pnldc1B2RXZ1 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pnldc1B2RXZ1 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pnldc1B2RXZ1 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pnldc1B2RXZ1 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pnldc1B2RXZ1 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pnldc1B2RXZ1 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.56□□□□□ -0.24
Pnldc1B2RXZ1 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Pnldc1B2RXZ1 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Pnldc1B2RXZ1 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pnldc1B2RXZ1 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pnldc1B2RXZ1 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pnldc1B2RXZ1 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.56□□□□□ -0.24
Pnldc1B2RXZ1 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Pnldc1B2RXZ1 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Pnldc1B2RXZ1 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pnldc1B2RXZ1 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Pnldc1B2RXZ1 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Pnldc1B2RXZ1 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pnldc1B2RXZ1 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pnldc1B2RXZ1 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pnldc1B2RXZ1 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pnldc1B2RXZ1 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pnldc1B2RXZ1 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pnldc1B2RXZ1 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pnldc1B2RXZ1 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.55□□□□□ -0.24
Pnldc1B2RXZ1 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pnldc1B2RXZ1 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Pnldc1B2RXZ1 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.55□□□□□ -0.24
Pnldc1B2RXZ1 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pnldc1B2RXZ1 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pnldc1B2RXZ1 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
Pnldc1B2RXZ1 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.55□□□□□ -0.24
Pnldc1B2RXZ1 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pnldc1B2RXZ1 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Pnldc1B2RXZ1 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pnldc1B2RXZ1 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.55□□□□□ -0.24
Pnldc1B2RXZ1 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.55□□□□□ -0.24
Pnldc1B2RXZ1 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.55□□□□□ -0.24
Pnldc1B2RXZ1 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.55□□□□□ -0.24
Pnldc1B2RXZ1 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.55□□□□□ -0.24
Pnldc1B2RXZ1 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.55□□□□□ -0.24
Pnldc1B2RXZ1 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Pnldc1B2RXZ1 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.55□□□□□ -0.24
Pnldc1B2RXZ1 Gm9908-201ENSMUST00000211534 448 ntBASIC13.55□□□□□ -0.24
Pnldc1B2RXZ1 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.55□□□□□ -0.24
Pnldc1B2RXZ1 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.55□□□□□ -0.24
Pnldc1B2RXZ1 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.55□□□□□ -0.24
Pnldc1B2RXZ1 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pnldc1B2RXZ1 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.55□□□□□ -0.24
Pnldc1B2RXZ1 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pnldc1B2RXZ1 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.55□□□□□ -0.24
Pnldc1B2RXZ1 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pnldc1B2RXZ1 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.55□□□□□ -0.24
Pnldc1B2RXZ1 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pnldc1B2RXZ1 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
Pnldc1B2RXZ1 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.55□□□□□ -0.24
Pnldc1B2RXZ1 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms