Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC9.82□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Gm9522-201ENSMUST00000182394 926 ntBASIC9.82□□□□□ -0.84
Trav9n-2A0A0G2JDP3 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav9n-2A0A0G2JDP3 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav9n-2A0A0G2JDP3 AC165157.4-201ENSMUST00000220587 139 ntBASIC9.82□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav9n-2A0A0G2JDP3 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC9.82□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC9.82□□□□□ -0.84
Trav9n-2A0A0G2JDP3 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav9n-2A0A0G2JDP3 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav9n-2A0A0G2JDP3 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC9.82□□□□□ -0.84
Trav9n-2A0A0G2JDP3 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC9.82□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Gm44065-201ENSMUST00000203184 3527 ntBASIC9.81□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC9.81□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Gm15487-201ENSMUST00000122373 465 ntBASIC9.81□□□□□ -0.84
Trav9n-2A0A0G2JDP3 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC9.81□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC9.81□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Gm27306-201ENSMUST00000183970 107 ntBASIC9.81□□□□□ -0.84
Trav9n-2A0A0G2JDP3 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC9.81□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Gm17795-201ENSMUST00000214505 757 ntBASIC9.81□□□□□ -0.84
Trav9n-2A0A0G2JDP3 AC159114.1-201ENSMUST00000220349 266 ntBASIC9.81□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Gm14452-201ENSMUST00000118680 1632 ntBASIC9.81□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC9.81□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC9.81□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC9.81□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC9.81□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Gm20632-201ENSMUST00000176760 2427 ntBASIC9.81□□□□□ -0.84
Trav9n-2A0A0G2JDP3 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav9n-2A0A0G2JDP3 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Gm18244-201ENSMUST00000219747 1566 ntBASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms