Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav18A0A075B656 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav18A0A075B656 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC11.07□□□□□ -0.64
Trav18A0A075B656 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trav18A0A075B656 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav18A0A075B656 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav18A0A075B656 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav18A0A075B656 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav18A0A075B656 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav18A0A075B656 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav18A0A075B656 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav18A0A075B656 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav18A0A075B656 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav18A0A075B656 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav18A0A075B656 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav18A0A075B656 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav18A0A075B656 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC11.07□□□□□ -0.64
Trav18A0A075B656 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav18A0A075B656 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav18A0A075B656 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav18A0A075B656 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav18A0A075B656 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav18A0A075B656 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav18A0A075B656 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav18A0A075B656 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav18A0A075B656 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.06□□□□□ -0.64
Trav18A0A075B656 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav18A0A075B656 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav18A0A075B656 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav18A0A075B656 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav18A0A075B656 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav18A0A075B656 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav18A0A075B656 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav18A0A075B656 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav18A0A075B656 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav18A0A075B656 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav18A0A075B656 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav18A0A075B656 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav18A0A075B656 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav18A0A075B656 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav18A0A075B656 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav18A0A075B656 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC11.06□□□□□ -0.64
Trav18A0A075B656 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC11.06□□□□□ -0.64
Trav18A0A075B656 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav18A0A075B656 Gm4804-201ENSMUST00000182234 999 ntBASIC11.06□□□□□ -0.64
Trav18A0A075B656 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC11.06□□□□□ -0.64
Trav18A0A075B656 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav18A0A075B656 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav18A0A075B656 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav18A0A075B656 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav18A0A075B656 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav18A0A075B656 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav18A0A075B656 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
Trav18A0A075B656 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Trav18A0A075B656 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav18A0A075B656 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
Trav18A0A075B656 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav18A0A075B656 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav18A0A075B656 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav18A0A075B656 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav18A0A075B656 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav18A0A075B656 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav18A0A075B656 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav18A0A075B656 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav18A0A075B656 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav18A0A075B656 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav18A0A075B656 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav18A0A075B656 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav18A0A075B656 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav18A0A075B656 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav18A0A075B656 Gm14452-201ENSMUST00000118680 1632 ntBASIC11.06□□□□□ -0.64
Trav18A0A075B656 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav18A0A075B656 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Trav18A0A075B656 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav18A0A075B656 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.05□□□□□ -0.64
Trav18A0A075B656 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Trav18A0A075B656 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav18A0A075B656 Gm5320-201ENSMUST00000207163 1519 ntBASIC11.05□□□□□ -0.64
Trav18A0A075B656 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav18A0A075B656 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav18A0A075B656 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav18A0A075B656 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav18A0A075B656 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.05□□□□□ -0.64
Trav18A0A075B656 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav18A0A075B656 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav18A0A075B656 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav18A0A075B656 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav18A0A075B656 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav18A0A075B656 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC11.05□□□□□ -0.64
Trav18A0A075B656 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav18A0A075B656 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Trav18A0A075B656 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav18A0A075B656 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav18A0A075B656 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Trav18A0A075B656 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Trav18A0A075B656 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav18A0A075B656 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC11.05□□□□□ -0.64
Trav18A0A075B656 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC11.05□□□□□ -0.64
Trav18A0A075B656 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav18A0A075B656 Gm10766-202ENSMUST00000194123 606 ntBASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms