Protein–RNA interactions for Protein: Q9Z1B8

Phf1, PHD finger protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf1Q9Z1B8 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Phf1Q9Z1B8 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Phf1Q9Z1B8 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Phf1Q9Z1B8 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.45□□□□□ -0.42
Phf1Q9Z1B8 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Phf1Q9Z1B8 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Phf1Q9Z1B8 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Phf1Q9Z1B8 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.45□□□□□ -0.42
Phf1Q9Z1B8 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Phf1Q9Z1B8 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Phf1Q9Z1B8 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Phf1Q9Z1B8 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Phf1Q9Z1B8 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Phf1Q9Z1B8 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Phf1Q9Z1B8 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Phf1Q9Z1B8 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.45□□□□□ -0.42
Phf1Q9Z1B8 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.45□□□□□ -0.42
Phf1Q9Z1B8 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Phf1Q9Z1B8 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Phf1Q9Z1B8 Grk6-205ENSMUST00000224653 2976 ntBASIC12.45□□□□□ -0.42
Phf1Q9Z1B8 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Phf1Q9Z1B8 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.45□□□□□ -0.42
Phf1Q9Z1B8 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Phf1Q9Z1B8 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Phf1Q9Z1B8 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Phf1Q9Z1B8 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Phf1Q9Z1B8 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Phf1Q9Z1B8 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Phf1Q9Z1B8 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Phf1Q9Z1B8 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Phf1Q9Z1B8 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Phf1Q9Z1B8 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Phf1Q9Z1B8 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Phf1Q9Z1B8 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Phf1Q9Z1B8 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Phf1Q9Z1B8 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Phf1Q9Z1B8 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.44□□□□□ -0.42
Phf1Q9Z1B8 Gm13829-201ENSMUST00000119600 138 ntBASIC12.44□□□□□ -0.42
Phf1Q9Z1B8 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.44□□□□□ -0.42
Phf1Q9Z1B8 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Phf1Q9Z1B8 Gm8927-201ENSMUST00000181978 981 ntBASIC12.44□□□□□ -0.42
Phf1Q9Z1B8 Mir7085-201ENSMUST00000184353 66 ntBASIC12.44□□□□□ -0.42
Phf1Q9Z1B8 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.44□□□□□ -0.42
Phf1Q9Z1B8 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.44□□□□□ -0.42
Phf1Q9Z1B8 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.44□□□□□ -0.42
Phf1Q9Z1B8 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.44□□□□□ -0.42
Phf1Q9Z1B8 Gm18062-201ENSMUST00000208020 547 ntBASIC12.44□□□□□ -0.42
Phf1Q9Z1B8 Gm18055-201ENSMUST00000208254 547 ntBASIC12.44□□□□□ -0.42
Phf1Q9Z1B8 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Phf1Q9Z1B8 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.44□□□□□ -0.42
Phf1Q9Z1B8 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Phf1Q9Z1B8 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Phf1Q9Z1B8 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Phf1Q9Z1B8 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Phf1Q9Z1B8 Gm3222-201ENSMUST00000071282 990 ntBASIC12.44□□□□□ -0.42
Phf1Q9Z1B8 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Phf1Q9Z1B8 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Phf1Q9Z1B8 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Phf1Q9Z1B8 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Phf1Q9Z1B8 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Phf1Q9Z1B8 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Phf1Q9Z1B8 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Phf1Q9Z1B8 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Phf1Q9Z1B8 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Phf1Q9Z1B8 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Phf1Q9Z1B8 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Phf1Q9Z1B8 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.44□□□□□ -0.42
Phf1Q9Z1B8 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Phf1Q9Z1B8 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Phf1Q9Z1B8 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Phf1Q9Z1B8 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Phf1Q9Z1B8 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.43□□□□□ -0.42
Phf1Q9Z1B8 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Phf1Q9Z1B8 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Phf1Q9Z1B8 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Phf1Q9Z1B8 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Phf1Q9Z1B8 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Phf1Q9Z1B8 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Phf1Q9Z1B8 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.43□□□□□ -0.42
Phf1Q9Z1B8 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Phf1Q9Z1B8 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.43□□□□□ -0.42
Phf1Q9Z1B8 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Phf1Q9Z1B8 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Phf1Q9Z1B8 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Phf1Q9Z1B8 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Phf1Q9Z1B8 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Phf1Q9Z1B8 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.43□□□□□ -0.42
Phf1Q9Z1B8 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Phf1Q9Z1B8 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.43□□□□□ -0.42
Phf1Q9Z1B8 Gm15824-201ENSMUST00000119516 955 ntBASIC12.43□□□□□ -0.42
Phf1Q9Z1B8 Gm15806-201ENSMUST00000120696 955 ntBASIC12.43□□□□□ -0.42
Phf1Q9Z1B8 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.43□□□□□ -0.42
Phf1Q9Z1B8 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Phf1Q9Z1B8 Gm27701-201ENSMUST00000184498 110 ntBASIC12.43□□□□□ -0.42
Phf1Q9Z1B8 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.43□□□□□ -0.42
Phf1Q9Z1B8 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Phf1Q9Z1B8 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.43□□□□□ -0.42
Phf1Q9Z1B8 Gm44719-201ENSMUST00000206404 149 ntBASIC12.43□□□□□ -0.42
Phf1Q9Z1B8 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.43□□□□□ -0.42
Phf1Q9Z1B8 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms