Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx9Q9WUH2 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.83□□□□□ -0.36
Lhx9Q9WUH2 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.83□□□□□ -0.36
Lhx9Q9WUH2 Acot6-202ENSMUST00000222921 3622 ntBASIC12.83□□□□□ -0.36
Lhx9Q9WUH2 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx9Q9WUH2 Gm12742-201ENSMUST00000117326 410 ntBASIC12.83□□□□□ -0.36
Lhx9Q9WUH2 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.83□□□□□ -0.36
Lhx9Q9WUH2 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx9Q9WUH2 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx9Q9WUH2 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx9Q9WUH2 Gm8652-201ENSMUST00000181363 964 ntBASIC12.83□□□□□ -0.36
Lhx9Q9WUH2 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx9Q9WUH2 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx9Q9WUH2 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx9Q9WUH2 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx9Q9WUH2 Gm24447-201ENSMUST00000083977 338 ntBASIC12.83□□□□□ -0.36
Lhx9Q9WUH2 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Lhx9Q9WUH2 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx9Q9WUH2 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx9Q9WUH2 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx9Q9WUH2 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx9Q9WUH2 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx9Q9WUH2 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx9Q9WUH2 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx9Q9WUH2 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx9Q9WUH2 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx9Q9WUH2 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx9Q9WUH2 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx9Q9WUH2 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx9Q9WUH2 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx9Q9WUH2 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx9Q9WUH2 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx9Q9WUH2 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.82□□□□□ -0.36
Lhx9Q9WUH2 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx9Q9WUH2 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx9Q9WUH2 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.82□□□□□ -0.36
Lhx9Q9WUH2 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx9Q9WUH2 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Lhx9Q9WUH2 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.82□□□□□ -0.36
Lhx9Q9WUH2 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx9Q9WUH2 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx9Q9WUH2 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx9Q9WUH2 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx9Q9WUH2 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx9Q9WUH2 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.82□□□□□ -0.36
Lhx9Q9WUH2 Gm27847-201ENSMUST00000183711 107 ntBASIC12.82□□□□□ -0.36
Lhx9Q9WUH2 Gm27375-201ENSMUST00000183799 107 ntBASIC12.82□□□□□ -0.36
Lhx9Q9WUH2 Gm44397-201ENSMUST00000195950 113 ntBASIC12.82□□□□□ -0.36
Lhx9Q9WUH2 Gm45841-201ENSMUST00000207700 164 ntBASIC12.82□□□□□ -0.36
Lhx9Q9WUH2 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.82□□□□□ -0.36
Lhx9Q9WUH2 Gm17330-201ENSMUST00000221047 165 ntBASIC12.82□□□□□ -0.36
Lhx9Q9WUH2 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx9Q9WUH2 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx9Q9WUH2 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.82□□□□□ -0.36
Lhx9Q9WUH2 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx9Q9WUH2 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx9Q9WUH2 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx9Q9WUH2 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx9Q9WUH2 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx9Q9WUH2 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx9Q9WUH2 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx9Q9WUH2 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx9Q9WUH2 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx9Q9WUH2 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx9Q9WUH2 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Lhx9Q9WUH2 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.81□□□□□ -0.36
Lhx9Q9WUH2 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx9Q9WUH2 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.81□□□□□ -0.36
Lhx9Q9WUH2 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx9Q9WUH2 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx9Q9WUH2 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx9Q9WUH2 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Lhx9Q9WUH2 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx9Q9WUH2 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx9Q9WUH2 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx9Q9WUH2 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx9Q9WUH2 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.81□□□□□ -0.36
Lhx9Q9WUH2 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.81□□□□□ -0.36
Lhx9Q9WUH2 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx9Q9WUH2 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.81□□□□□ -0.36
Lhx9Q9WUH2 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.81□□□□□ -0.36
Lhx9Q9WUH2 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.81□□□□□ -0.36
Lhx9Q9WUH2 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.81□□□□□ -0.36
Lhx9Q9WUH2 Gm12403-201ENSMUST00000121384 959 ntBASIC12.81□□□□□ -0.36
Lhx9Q9WUH2 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.81□□□□□ -0.36
Lhx9Q9WUH2 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.81□□□□□ -0.36
Lhx9Q9WUH2 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.81□□□□□ -0.36
Lhx9Q9WUH2 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.81□□□□□ -0.36
Lhx9Q9WUH2 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.81□□□□□ -0.36
Lhx9Q9WUH2 Gm38671-201ENSMUST00000200573 130 ntBASIC12.81□□□□□ -0.36
Lhx9Q9WUH2 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Lhx9Q9WUH2 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.81□□□□□ -0.36
Lhx9Q9WUH2 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.81□□□□□ -0.36
Lhx9Q9WUH2 Gm5161-201ENSMUST00000075243 853 ntBASIC12.81□□□□□ -0.36
Lhx9Q9WUH2 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Lhx9Q9WUH2 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.81□□□□□ -0.36
Lhx9Q9WUH2 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx9Q9WUH2 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx9Q9WUH2 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx9Q9WUH2 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms