Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Chaf1aQ9QWF0 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC15.16■□□□□ 0.02
Chaf1aQ9QWF0 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chaf1aQ9QWF0 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC15.16■□□□□ 0.02
Chaf1aQ9QWF0 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chaf1aQ9QWF0 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chaf1aQ9QWF0 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chaf1aQ9QWF0 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chaf1aQ9QWF0 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chaf1aQ9QWF0 Gm42706-201ENSMUST00000199733 1910 ntBASIC15.15■□□□□ 0.02
Chaf1aQ9QWF0 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chaf1aQ9QWF0 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chaf1aQ9QWF0 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chaf1aQ9QWF0 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Chaf1aQ9QWF0 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Chaf1aQ9QWF0 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chaf1aQ9QWF0 Gm23935-201ENSMUST00000102303 57 ntBASIC15.15■□□□□ 0.02
Chaf1aQ9QWF0 Gm24270-201ENSMUST00000102326 57 ntBASIC15.15■□□□□ 0.02
Chaf1aQ9QWF0 Mir449b-201ENSMUST00000104833 80 ntBASIC15.15■□□□□ 0.02
Chaf1aQ9QWF0 Gm24245-201ENSMUST00000157318 57 ntBASIC15.15■□□□□ 0.02
Chaf1aQ9QWF0 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Chaf1aQ9QWF0 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC15.15■□□□□ 0.02
Chaf1aQ9QWF0 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.15■□□□□ 0.02
Chaf1aQ9QWF0 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chaf1aQ9QWF0 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chaf1aQ9QWF0 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chaf1aQ9QWF0 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Chaf1aQ9QWF0 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chaf1aQ9QWF0 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chaf1aQ9QWF0 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chaf1aQ9QWF0 Gm13517-201ENSMUST00000120782 1495 ntBASIC15.14■□□□□ 0.01
Chaf1aQ9QWF0 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chaf1aQ9QWF0 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chaf1aQ9QWF0 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Chaf1aQ9QWF0 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chaf1aQ9QWF0 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Chaf1aQ9QWF0 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chaf1aQ9QWF0 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chaf1aQ9QWF0 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chaf1aQ9QWF0 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chaf1aQ9QWF0 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chaf1aQ9QWF0 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Chaf1aQ9QWF0 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Chaf1aQ9QWF0 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Chaf1aQ9QWF0 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC15.14■□□□□ 0.01
Chaf1aQ9QWF0 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Chaf1aQ9QWF0 Gm33320-201ENSMUST00000192232 530 ntBASIC15.14■□□□□ 0.01
Chaf1aQ9QWF0 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC15.14■□□□□ 0.01
Chaf1aQ9QWF0 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.14■□□□□ 0.01
Chaf1aQ9QWF0 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Chaf1aQ9QWF0 AC149294.4-201ENSMUST00000227870 882 ntBASIC15.14■□□□□ 0.01
Chaf1aQ9QWF0 Rbfox2-208ENSMUST00000227930 1218 ntBASIC15.14■□□□□ 0.01
Chaf1aQ9QWF0 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chaf1aQ9QWF0 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Chaf1aQ9QWF0 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chaf1aQ9QWF0 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chaf1aQ9QWF0 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Chaf1aQ9QWF0 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chaf1aQ9QWF0 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chaf1aQ9QWF0 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Chaf1aQ9QWF0 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Chaf1aQ9QWF0 Gm43321-201ENSMUST00000198897 2409 ntBASIC15.14■□□□□ 0.01
Chaf1aQ9QWF0 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chaf1aQ9QWF0 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chaf1aQ9QWF0 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chaf1aQ9QWF0 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chaf1aQ9QWF0 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chaf1aQ9QWF0 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chaf1aQ9QWF0 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chaf1aQ9QWF0 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Chaf1aQ9QWF0 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chaf1aQ9QWF0 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chaf1aQ9QWF0 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chaf1aQ9QWF0 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chaf1aQ9QWF0 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chaf1aQ9QWF0 Gm37644-201ENSMUST00000192190 2270 ntBASIC15.13■□□□□ 0.01
Chaf1aQ9QWF0 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chaf1aQ9QWF0 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Chaf1aQ9QWF0 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chaf1aQ9QWF0 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Chaf1aQ9QWF0 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chaf1aQ9QWF0 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chaf1aQ9QWF0 Gm37277-201ENSMUST00000194052 1111 ntBASIC15.13■□□□□ 0.01
Chaf1aQ9QWF0 Gm5312-201ENSMUST00000203728 547 ntBASIC15.13■□□□□ 0.01
Chaf1aQ9QWF0 AC154595.3-201ENSMUST00000224579 384 ntBASIC15.13■□□□□ 0.01
Chaf1aQ9QWF0 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chaf1aQ9QWF0 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chaf1aQ9QWF0 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Chaf1aQ9QWF0 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Chaf1aQ9QWF0 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Chaf1aQ9QWF0 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC15.13■□□□□ 0.01
Chaf1aQ9QWF0 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chaf1aQ9QWF0 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC15.13■□□□□ 0.01
Chaf1aQ9QWF0 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chaf1aQ9QWF0 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chaf1aQ9QWF0 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chaf1aQ9QWF0 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chaf1aQ9QWF0 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chaf1aQ9QWF0 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chaf1aQ9QWF0 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms