Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Trem1Q9JKE2 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trem1Q9JKE2 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trem1Q9JKE2 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trem1Q9JKE2 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trem1Q9JKE2 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Trem1Q9JKE2 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trem1Q9JKE2 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trem1Q9JKE2 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trem1Q9JKE2 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.09□□□□□ -0.47
Trem1Q9JKE2 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trem1Q9JKE2 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.09□□□□□ -0.47
Trem1Q9JKE2 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trem1Q9JKE2 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trem1Q9JKE2 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trem1Q9JKE2 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trem1Q9JKE2 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trem1Q9JKE2 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.08□□□□□ -0.47
Trem1Q9JKE2 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trem1Q9JKE2 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Trem1Q9JKE2 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trem1Q9JKE2 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trem1Q9JKE2 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trem1Q9JKE2 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trem1Q9JKE2 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trem1Q9JKE2 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trem1Q9JKE2 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trem1Q9JKE2 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trem1Q9JKE2 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trem1Q9JKE2 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trem1Q9JKE2 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trem1Q9JKE2 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trem1Q9JKE2 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trem1Q9JKE2 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trem1Q9JKE2 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC12.08□□□□□ -0.48
Trem1Q9JKE2 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trem1Q9JKE2 Gm8749-201ENSMUST00000117737 331 ntBASIC12.08□□□□□ -0.48
Trem1Q9JKE2 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trem1Q9JKE2 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.08□□□□□ -0.48
Trem1Q9JKE2 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Trem1Q9JKE2 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trem1Q9JKE2 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.08□□□□□ -0.48
Trem1Q9JKE2 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC12.08□□□□□ -0.48
Trem1Q9JKE2 Gm13830-205ENSMUST00000201195 1155 ntBASIC12.08□□□□□ -0.48
Trem1Q9JKE2 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trem1Q9JKE2 AC159301.1-201ENSMUST00000225130 1182 ntBASIC12.08□□□□□ -0.48
Trem1Q9JKE2 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trem1Q9JKE2 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trem1Q9JKE2 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trem1Q9JKE2 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trem1Q9JKE2 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.08□□□□□ -0.48
Trem1Q9JKE2 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trem1Q9JKE2 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trem1Q9JKE2 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trem1Q9JKE2 Gm3928-201ENSMUST00000121141 1307 ntBASIC12.08□□□□□ -0.48
Trem1Q9JKE2 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Trem1Q9JKE2 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trem1Q9JKE2 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.08□□□□□ -0.48
Trem1Q9JKE2 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trem1Q9JKE2 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trem1Q9JKE2 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trem1Q9JKE2 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trem1Q9JKE2 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trem1Q9JKE2 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trem1Q9JKE2 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trem1Q9JKE2 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trem1Q9JKE2 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trem1Q9JKE2 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trem1Q9JKE2 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trem1Q9JKE2 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trem1Q9JKE2 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trem1Q9JKE2 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trem1Q9JKE2 Gm17244-201ENSMUST00000192482 3416 ntBASIC12.07□□□□□ -0.48
Trem1Q9JKE2 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.07□□□□□ -0.48
Trem1Q9JKE2 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trem1Q9JKE2 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trem1Q9JKE2 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trem1Q9JKE2 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trem1Q9JKE2 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trem1Q9JKE2 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC12.07□□□□□ -0.48
Trem1Q9JKE2 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trem1Q9JKE2 Gm13464-201ENSMUST00000119418 935 ntBASIC12.07□□□□□ -0.48
Trem1Q9JKE2 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trem1Q9JKE2 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trem1Q9JKE2 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC12.07□□□□□ -0.48
Trem1Q9JKE2 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Trem1Q9JKE2 Gm37500-201ENSMUST00000192059 1443 ntBASIC12.07□□□□□ -0.48
Trem1Q9JKE2 Gm33142-201ENSMUST00000193913 867 ntBASIC12.07□□□□□ -0.48
Trem1Q9JKE2 Gm6089-201ENSMUST00000197666 938 ntBASIC12.07□□□□□ -0.48
Trem1Q9JKE2 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC12.07□□□□□ -0.48
Trem1Q9JKE2 Gm18246-201ENSMUST00000221023 728 ntBASIC12.07□□□□□ -0.48
Trem1Q9JKE2 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trem1Q9JKE2 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trem1Q9JKE2 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC12.07□□□□□ -0.48
Trem1Q9JKE2 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trem1Q9JKE2 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trem1Q9JKE2 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trem1Q9JKE2 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trem1Q9JKE2 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trem1Q9JKE2 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms