Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpsf1Q9EPU4 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpsf1Q9EPU4 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
Cpsf1Q9EPU4 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpsf1Q9EPU4 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cpsf1Q9EPU4 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpsf1Q9EPU4 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpsf1Q9EPU4 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpsf1Q9EPU4 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC18.4■□□□□ 0.54
Cpsf1Q9EPU4 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpsf1Q9EPU4 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Cpsf1Q9EPU4 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpsf1Q9EPU4 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC18.4■□□□□ 0.54
Cpsf1Q9EPU4 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpsf1Q9EPU4 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpsf1Q9EPU4 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Cpsf1Q9EPU4 Gm12329-201ENSMUST00000120829 1007 ntBASIC18.4■□□□□ 0.54
Cpsf1Q9EPU4 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Cpsf1Q9EPU4 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cpsf1Q9EPU4 Gm45880-201ENSMUST00000213041 853 ntBASIC18.4■□□□□ 0.54
Cpsf1Q9EPU4 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpsf1Q9EPU4 Gm17383-201ENSMUST00000078739 1041 ntBASIC18.4■□□□□ 0.54
Cpsf1Q9EPU4 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cpsf1Q9EPU4 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Cpsf1Q9EPU4 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cpsf1Q9EPU4 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
Cpsf1Q9EPU4 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cpsf1Q9EPU4 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cpsf1Q9EPU4 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cpsf1Q9EPU4 Gm44891-201ENSMUST00000208817 2223 ntBASIC18.39■□□□□ 0.53
Cpsf1Q9EPU4 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cpsf1Q9EPU4 Gm8793-201ENSMUST00000183069 1303 ntBASIC18.39■□□□□ 0.53
Cpsf1Q9EPU4 Gm9025-201ENSMUST00000122415 1575 ntBASIC18.39■□□□□ 0.53
Cpsf1Q9EPU4 AC113060.1-201ENSMUST00000225689 1573 ntBASIC18.39■□□□□ 0.53
Cpsf1Q9EPU4 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cpsf1Q9EPU4 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Cpsf1Q9EPU4 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cpsf1Q9EPU4 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cpsf1Q9EPU4 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
Cpsf1Q9EPU4 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Cpsf1Q9EPU4 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cpsf1Q9EPU4 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cpsf1Q9EPU4 Gm13786-201ENSMUST00000122371 333 ntBASIC18.39■□□□□ 0.53
Cpsf1Q9EPU4 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC18.39■□□□□ 0.53
Cpsf1Q9EPU4 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC18.39■□□□□ 0.53
Cpsf1Q9EPU4 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC18.39■□□□□ 0.53
Cpsf1Q9EPU4 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC18.39■□□□□ 0.53
Cpsf1Q9EPU4 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC18.39■□□□□ 0.53
Cpsf1Q9EPU4 Gm38158-201ENSMUST00000194617 339 ntBASIC18.39■□□□□ 0.53
Cpsf1Q9EPU4 Gm37008-201ENSMUST00000195712 319 ntBASIC18.39■□□□□ 0.53
Cpsf1Q9EPU4 Ighv8-10-201ENSMUST00000199579 358 ntBASIC18.39■□□□□ 0.53
Cpsf1Q9EPU4 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cpsf1Q9EPU4 Gm19163-201ENSMUST00000223313 780 ntBASIC18.39■□□□□ 0.53
Cpsf1Q9EPU4 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cpsf1Q9EPU4 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Cpsf1Q9EPU4 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Cpsf1Q9EPU4 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cpsf1Q9EPU4 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Cpsf1Q9EPU4 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpsf1Q9EPU4 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpsf1Q9EPU4 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpsf1Q9EPU4 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpsf1Q9EPU4 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cpsf1Q9EPU4 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpsf1Q9EPU4 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpsf1Q9EPU4 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpsf1Q9EPU4 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpsf1Q9EPU4 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC18.38■□□□□ 0.53
Cpsf1Q9EPU4 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC18.38■□□□□ 0.53
Cpsf1Q9EPU4 Gm3890-201ENSMUST00000182416 207 ntBASIC18.38■□□□□ 0.53
Cpsf1Q9EPU4 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC18.38■□□□□ 0.53
Cpsf1Q9EPU4 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC18.38■□□□□ 0.53
Cpsf1Q9EPU4 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpsf1Q9EPU4 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpsf1Q9EPU4 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpsf1Q9EPU4 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Cpsf1Q9EPU4 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpsf1Q9EPU4 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
Cpsf1Q9EPU4 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpsf1Q9EPU4 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpsf1Q9EPU4 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
Cpsf1Q9EPU4 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC18.37■□□□□ 0.53
Cpsf1Q9EPU4 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC18.37■□□□□ 0.53
Cpsf1Q9EPU4 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cpsf1Q9EPU4 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cpsf1Q9EPU4 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cpsf1Q9EPU4 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cpsf1Q9EPU4 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cpsf1Q9EPU4 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cpsf1Q9EPU4 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Cpsf1Q9EPU4 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Cpsf1Q9EPU4 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cpsf1Q9EPU4 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cpsf1Q9EPU4 Gm9431-201ENSMUST00000119765 1051 ntBASIC18.37■□□□□ 0.53
Cpsf1Q9EPU4 Gm14704-201ENSMUST00000120300 874 ntBASIC18.37■□□□□ 0.53
Cpsf1Q9EPU4 Gm11658-201ENSMUST00000120913 1008 ntBASIC18.37■□□□□ 0.53
Cpsf1Q9EPU4 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cpsf1Q9EPU4 Gm2467-201ENSMUST00000182266 1010 ntBASIC18.37■□□□□ 0.53
Cpsf1Q9EPU4 Gm6981-201ENSMUST00000182467 1008 ntBASIC18.37■□□□□ 0.53
Cpsf1Q9EPU4 Gm9061-201ENSMUST00000182707 1006 ntBASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms