Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Hmg20aQ9DC33 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Hmg20aQ9DC33 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hmg20aQ9DC33 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Hmg20aQ9DC33 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmg20aQ9DC33 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.32□□□□□ -0.44
Hmg20aQ9DC33 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hmg20aQ9DC33 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmg20aQ9DC33 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmg20aQ9DC33 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Hmg20aQ9DC33 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmg20aQ9DC33 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmg20aQ9DC33 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmg20aQ9DC33 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmg20aQ9DC33 Gm6184-201ENSMUST00000120403 1261 ntBASIC12.32□□□□□ -0.44
Hmg20aQ9DC33 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.32□□□□□ -0.44
Hmg20aQ9DC33 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hmg20aQ9DC33 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Hmg20aQ9DC33 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Hmg20aQ9DC33 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC12.32□□□□□ -0.44
Hmg20aQ9DC33 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Hmg20aQ9DC33 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hmg20aQ9DC33 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hmg20aQ9DC33 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmg20aQ9DC33 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.32□□□□□ -0.44
Hmg20aQ9DC33 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmg20aQ9DC33 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmg20aQ9DC33 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmg20aQ9DC33 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmg20aQ9DC33 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmg20aQ9DC33 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Hmg20aQ9DC33 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmg20aQ9DC33 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Hmg20aQ9DC33 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmg20aQ9DC33 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmg20aQ9DC33 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hmg20aQ9DC33 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.32□□□□□ -0.44
Hmg20aQ9DC33 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmg20aQ9DC33 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmg20aQ9DC33 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmg20aQ9DC33 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmg20aQ9DC33 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmg20aQ9DC33 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmg20aQ9DC33 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmg20aQ9DC33 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hmg20aQ9DC33 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmg20aQ9DC33 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmg20aQ9DC33 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmg20aQ9DC33 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmg20aQ9DC33 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Hmg20aQ9DC33 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Hmg20aQ9DC33 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmg20aQ9DC33 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hmg20aQ9DC33 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmg20aQ9DC33 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Hmg20aQ9DC33 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hmg20aQ9DC33 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.31□□□□□ -0.44
Hmg20aQ9DC33 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmg20aQ9DC33 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.31□□□□□ -0.44
Hmg20aQ9DC33 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC12.31□□□□□ -0.44
Hmg20aQ9DC33 Gm17971-201ENSMUST00000190239 806 ntBASIC12.31□□□□□ -0.44
Hmg20aQ9DC33 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC12.31□□□□□ -0.44
Hmg20aQ9DC33 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
Hmg20aQ9DC33 Gm10060-201ENSMUST00000212002 111 ntBASIC12.31□□□□□ -0.44
Hmg20aQ9DC33 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmg20aQ9DC33 AV026068-213ENSMUST00000223675 1171 ntBASIC12.31□□□□□ -0.44
Hmg20aQ9DC33 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmg20aQ9DC33 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmg20aQ9DC33 Gm10819-201ENSMUST00000099988 561 ntBASIC12.31□□□□□ -0.44
Hmg20aQ9DC33 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmg20aQ9DC33 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmg20aQ9DC33 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Hmg20aQ9DC33 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmg20aQ9DC33 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Hmg20aQ9DC33 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmg20aQ9DC33 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmg20aQ9DC33 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmg20aQ9DC33 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmg20aQ9DC33 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hmg20aQ9DC33 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hmg20aQ9DC33 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.31□□□□□ -0.44
Hmg20aQ9DC33 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC12.31□□□□□ -0.44
Hmg20aQ9DC33 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmg20aQ9DC33 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmg20aQ9DC33 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Hmg20aQ9DC33 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmg20aQ9DC33 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.31□□□□□ -0.44
Hmg20aQ9DC33 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmg20aQ9DC33 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmg20aQ9DC33 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Hmg20aQ9DC33 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmg20aQ9DC33 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmg20aQ9DC33 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hmg20aQ9DC33 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmg20aQ9DC33 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmg20aQ9DC33 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmg20aQ9DC33 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.3□□□□□ -0.44
Hmg20aQ9DC33 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hmg20aQ9DC33 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Hmg20aQ9DC33 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms