Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
Rrp8Q9DB85 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.2□□□□□ -0.3
Rrp8Q9DB85 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rrp8Q9DB85 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.2□□□□□ -0.3
Rrp8Q9DB85 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rrp8Q9DB85 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rrp8Q9DB85 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rrp8Q9DB85 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rrp8Q9DB85 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rrp8Q9DB85 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rrp8Q9DB85 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rrp8Q9DB85 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rrp8Q9DB85 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rrp8Q9DB85 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rrp8Q9DB85 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rrp8Q9DB85 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rrp8Q9DB85 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rrp8Q9DB85 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.2□□□□□ -0.3
Rrp8Q9DB85 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rrp8Q9DB85 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.2□□□□□ -0.3
Rrp8Q9DB85 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rrp8Q9DB85 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Rrp8Q9DB85 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.19□□□□□ -0.3
Rrp8Q9DB85 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rrp8Q9DB85 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rrp8Q9DB85 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rrp8Q9DB85 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rrp8Q9DB85 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rrp8Q9DB85 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rrp8Q9DB85 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rrp8Q9DB85 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rrp8Q9DB85 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Rrp8Q9DB85 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rrp8Q9DB85 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Rrp8Q9DB85 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rrp8Q9DB85 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.19□□□□□ -0.3
Rrp8Q9DB85 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rrp8Q9DB85 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.19□□□□□ -0.3
Rrp8Q9DB85 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Rrp8Q9DB85 Gm12241-201ENSMUST00000118330 726 ntBASIC13.19□□□□□ -0.3
Rrp8Q9DB85 Gm11793-201ENSMUST00000120433 981 ntBASIC13.19□□□□□ -0.3
Rrp8Q9DB85 Gm12134-201ENSMUST00000122109 520 ntBASIC13.19□□□□□ -0.3
Rrp8Q9DB85 Gm16379-201ENSMUST00000161469 348 ntBASIC13.19□□□□□ -0.3
Rrp8Q9DB85 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.19□□□□□ -0.3
Rrp8Q9DB85 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC13.19□□□□□ -0.3
Rrp8Q9DB85 Gm8762-201ENSMUST00000193486 339 ntBASIC13.19□□□□□ -0.3
Rrp8Q9DB85 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.19□□□□□ -0.3
Rrp8Q9DB85 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.19□□□□□ -0.3
Rrp8Q9DB85 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.19□□□□□ -0.3
Rrp8Q9DB85 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.19□□□□□ -0.3
Rrp8Q9DB85 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rrp8Q9DB85 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rrp8Q9DB85 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rrp8Q9DB85 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rrp8Q9DB85 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Rrp8Q9DB85 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.19□□□□□ -0.3
Rrp8Q9DB85 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rrp8Q9DB85 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rrp8Q9DB85 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Rrp8Q9DB85 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rrp8Q9DB85 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Rrp8Q9DB85 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Rrp8Q9DB85 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.19□□□□□ -0.3
Rrp8Q9DB85 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rrp8Q9DB85 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rrp8Q9DB85 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rrp8Q9DB85 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rrp8Q9DB85 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Rrp8Q9DB85 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rrp8Q9DB85 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Rrp8Q9DB85 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.19□□□□□ -0.3
Rrp8Q9DB85 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rrp8Q9DB85 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rrp8Q9DB85 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.18□□□□□ -0.3
Rrp8Q9DB85 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rrp8Q9DB85 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rrp8Q9DB85 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rrp8Q9DB85 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rrp8Q9DB85 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rrp8Q9DB85 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rrp8Q9DB85 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rrp8Q9DB85 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rrp8Q9DB85 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rrp8Q9DB85 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rrp8Q9DB85 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Rrp8Q9DB85 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC13.18□□□□□ -0.3
Rrp8Q9DB85 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.18□□□□□ -0.3
Rrp8Q9DB85 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Rrp8Q9DB85 Gm38241-201ENSMUST00000192641 898 ntBASIC13.18□□□□□ -0.3
Rrp8Q9DB85 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.18□□□□□ -0.3
Rrp8Q9DB85 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rrp8Q9DB85 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Rrp8Q9DB85 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.18□□□□□ -0.3
Rrp8Q9DB85 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.18□□□□□ -0.3
Rrp8Q9DB85 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Rrp8Q9DB85 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rrp8Q9DB85 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
Rrp8Q9DB85 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rrp8Q9DB85 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rrp8Q9DB85 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms